Gene Francci3_2667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2667 
Symbol 
ID3904891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3148796 
End bp3149662 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content70% 
IMG OID637879992 
Productmethenyltetrahydrofolate cyclohydrolase 
Protein accessionYP_481758 
Protein GI86741358 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.267301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCAG TGATAATCGA CGGCAAGGCC GTCGCCCGCA GAGTGCGTGA GAACGTGGCC 
AGGGAGGTCG CTGAGTTCCG CGACCGGACC GGCATCCAGC CCGGCCTCGC GACCGTGCTC
GTGGGTGACG ACCCCGCGTC CGCCGTGTAC GTCGGTGGCA AGCGTCGGGC CTGTGTCGAG
GCCGGCATGG CCGACCTGCA TCAACACCTG CCGGCCGACA CCTCCCAGGA GAAGGTCGCG
GCGCTCTTGG ATGATCTTGC CGCCGATCCG GCCGTGTCGG GTATTCTGCT GCAGCTTCCG
GTGCCCGAAG GCTTGGACGG GGCCGCGCTC GTCGGCCGGA TCCCACCCGG GAAGGACGTT
GACGGGCTCA CCACCGCCAG CGTCGGTCTG CTCGCCCGGG GTCTGCCGGG TCTGCGGCCC
TGCACACCGT CCGGGATCAT CGAGTTGCTG GACTCCTACG ACGTCGAGTT GTCCGGTACG
CCCACGGTCG TCGTCGGTCG TTCGGAGCTG GTCGGTCGTC CGGTGGCAGC GCTGCTGGTG
GGACGTAACG CGACCCTAAC GATCTGTCAC TCCCGTACAC GGGACCTGGC GGCGGTCTGC
CGCGGCGCCG ACGTGCTCGT CGTCGCAGCG GGAAAGCAGG CGATCATCGG CGCCGACGCG
GTGAAGCCGG GCGCCACCGT CATCGACGTC GGCATGCACC GGACCCCGCA GGGCCTGCGT
GGCGACGTGG ATTTCGAGGC GGTGCGCGAG GTGGCCGGGA AATTGACCCC GGTGCCGGGC
GGGGTGGGGC CGATGACGAT CGCGATGCTG CTGCGCAACA CCCTGCTCGC TGCGCAGGCC
GCCACCGGGA CGGACGGTCC GGGCTGA
 
Protein sequence
MSAVIIDGKA VARRVRENVA REVAEFRDRT GIQPGLATVL VGDDPASAVY VGGKRRACVE 
AGMADLHQHL PADTSQEKVA ALLDDLAADP AVSGILLQLP VPEGLDGAAL VGRIPPGKDV
DGLTTASVGL LARGLPGLRP CTPSGIIELL DSYDVELSGT PTVVVGRSEL VGRPVAALLV
GRNATLTICH SRTRDLAAVC RGADVLVVAA GKQAIIGADA VKPGATVIDV GMHRTPQGLR
GDVDFEAVRE VAGKLTPVPG GVGPMTIAML LRNTLLAAQA ATGTDGPG