| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2656 |
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| Symbol | |
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| ID | 3906329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3135839 |
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| End bp | 3137425 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637879981 |
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| Product | 2-methylcitrate dehydratase |
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| Protein accession | YP_481747 |
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| Protein GI | 86741347 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.298915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.184722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGC ACGAGGTGCG CGCCCGCCGG TCCGTCGAGG CGCCGCCCCG GCGTGACCAG
CTTGCCTGGA AGATCGCCGA GGTCGCCGCC GAGCGGGTGC CGGTGCCGCC GGAGGTCGTC
GAGATGATCG GCAACCGAAT CATCGACAAC GCGGCGGTCG CCGCGGCGGC GCTGACCCGC
GGCCCGGTCG TCGCGGCCCG CGACCAGGCG CTCGCCCATC CGTACACCCC GGGAGCGACG
GTCGTCGGCG TCGAGCGGGC AGTACGGGTG TCGCCGGAGT GGACGGCCTG GGCGAACGGC
GTCGCCGTGC GGGAACTGGA CTTCCACGAC ACCTACCTGG CCGCGGACTA CTCCCATCCG
GGCGACAACA TCCCCCCGGT GCTCGCCGTC GCGCAGCACA CCGGCCGCGG CGGCGCCGAG
CTGGTCCACG GGATCGCCAC CGCGTACGGG ATCCAGGTCG ACCTGGTGAC CGGCATCTGC
CTGCACGAAC ACCGCATCGA CCACATCGCC CACCTGGGCC CCTCCGCCGT CGCCGGGATC
GGTGCCCTGC TCGGCCTGCC CCCCGAGCCG ATCTACCAGG CCGTCGGCCA GGCGTTGCAC
ACGACGACGA CCACCCGTCA GGCCCGCAAG GGCGAGATCT CCACCTGGAA GGCGTACGCC
CCGGCCTTCG CCGGCAAGAC GGCGGTGGAG GCGGTCGACC GGGCGATGCG CGGCCAGACC
TCGCCGGCGC CGATCTACGA GGGGGAGGAC GGGGTCGTCG CCTGGCTGCT CGGCGGCCCG
GACGCGGTGT ACCGGGTGGC GCTGCCGGAA CCCGGCGAGC CCCGTCGGGG CATCCTCGCC
ACCTATCCCA AGGAGCACTC CGCCGAGTAC CAGAGCCAGG CGCTGATCGA CCTGGCCCGC
CGGCTGCGTA CCCGGCTGCC CGGGACCGGC TCGTCTCTCG GGGCCGGCTC GTCTCTCGGG
GCCGGCTCGT CCACGGCCTC CTCCGAAGCC TCCTTCGAGG TCGACGTCGC GGCGATCCGC
CAGATCGTCA TCCACACCAG CCATCACACG CATCACGTGA TCGGCACCGG CGCCGGGGAT
CCGCAGAAGG CCGATCCGAC CGCGAGCCGG GAGACGCTCG ACCATTCGAT CATGTATATC
TTCGCGGTGG CGCTGCAGGA CGGGACGTGG CACCACGAAC GTTCCTACGC CCCCGAACGG
GCCGCCCGGC CCGACACCGT CGCGCTGTGG CACCGGATCC GCACGGTGGA GGATCCGCAG
TGGACCCGCC GTTACCACGC GACCGACCCG GCCGAGCGGG CCTTCGGCGG GCGGGTGGAG
GTCACGCTCG TTGACGGGAC GTCGATCGTG GACGAGATCG CCGTCGCCGA CGCGCATCCG
GCCGGGGCCC GGCCGTTCCG GCGTGCGGAC TACGTCGCCA AGCTGCGTAT GCTCGCCGAG
GGGGTCGTGT CGGCCGCCGA ACAGGACCGG TTCCTCGACC TGGTCGGCCG GCTCGACACC
CTGACCCCGG CCGAGCTCGC CGGGCTGACC CTCGTCGCCG ACGCGCTCGC CCTGGAAACG
GGCGGGACGA GGGGGGTCTT CGCATGA
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| Protein sequence | MKLHEVRARR SVEAPPRRDQ LAWKIAEVAA ERVPVPPEVV EMIGNRIIDN AAVAAAALTR
GPVVAARDQA LAHPYTPGAT VVGVERAVRV SPEWTAWANG VAVRELDFHD TYLAADYSHP
GDNIPPVLAV AQHTGRGGAE LVHGIATAYG IQVDLVTGIC LHEHRIDHIA HLGPSAVAGI
GALLGLPPEP IYQAVGQALH TTTTTRQARK GEISTWKAYA PAFAGKTAVE AVDRAMRGQT
SPAPIYEGED GVVAWLLGGP DAVYRVALPE PGEPRRGILA TYPKEHSAEY QSQALIDLAR
RLRTRLPGTG SSLGAGSSLG AGSSTASSEA SFEVDVAAIR QIVIHTSHHT HHVIGTGAGD
PQKADPTASR ETLDHSIMYI FAVALQDGTW HHERSYAPER AARPDTVALW HRIRTVEDPQ
WTRRYHATDP AERAFGGRVE VTLVDGTSIV DEIAVADAHP AGARPFRRAD YVAKLRMLAE
GVVSAAEQDR FLDLVGRLDT LTPAELAGLT LVADALALET GGTRGVFA
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