| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2655 |
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| Symbol | |
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| ID | 3906328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3134964 |
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| End bp | 3135842 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637879980 |
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| Product | 2,3-dimethylmalate lyase |
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| Protein accession | YP_481746 |
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| Protein GI | 86741346 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.147366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.299253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGTGC CGGCCGGCCG GCCCGTCGCG GACAAGCGGC GGATGCTGCG GGCGGGTCTC
GCCTCCGGCC GCCTGCAACG CTGGCCGGGC GCGTTCGTCC CGCTGGTCGC GATGAGCATC
GAACGGACCG GTTTCGACGG CGTCTACGTC TCGGGGGCGG CGCTGTCCGC GGCGCTGGGA
CTGCCCGACA TCGGGCTGAC GACGCTGACC GAGGTCGCCG CGAGTGCCGG GCAGATCGCC
CGGGTCACCG ACCTGCCGAC CCTCGTCGAC GCCGACACGG GATTCGGTGA GCCGCTGAAC
GTGCACCGCA CGATCGGGCT GCTCGAGGAC GCCGGGCTCG CCGGCTGTCA CCTGGAGGAC
CAGGTCAACC CGAAGCGCTG CGGCCACCTG GACGACAAGG CGGTCGTCGG GCGCGACGAG
ATGGTGCGCC GCCTGCGCGC CGCGGTGGCG GCCCGCCGCG ACGACGCCTT CGTGCTCTGC
GCCCGCACCG ACGCCGTCGC CGTGGAGGGG CTGACCGCGG CGATTGACCG GGCCCGTGCC
TACGTTGACG CCGGCGCTGA CATGATCTTC CCGGAGGCGC TCGCCGACGA GCGGTCGTTC
GCGGCGTTCC GGGCCGCCGT CGACGTGCCG ATCCTCGCGA ACATGACCGA GTTCGGGAAG
TCGCCGCTGC TCACCGCGGC GCAGCTGACG GACCTCGGGG TCAATGCCGT CATCTATCCG
GTGACGACGC TGCGCGTGGC GATGGGCGCG ATCATCCGGG GGCTCGCGAC GCTCGCCGCC
GAGGGCACCC AGGCCGACCT GGTCCCGGCG ATGCAGACCC GCGCGGAGCT CTACGACCTG
CTCGACTACG CCGGCTACGG CGCCGCTGAC ATCCTTTGA
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| Protein sequence | MMVPAGRPVA DKRRMLRAGL ASGRLQRWPG AFVPLVAMSI ERTGFDGVYV SGAALSAALG
LPDIGLTTLT EVAASAGQIA RVTDLPTLVD ADTGFGEPLN VHRTIGLLED AGLAGCHLED
QVNPKRCGHL DDKAVVGRDE MVRRLRAAVA ARRDDAFVLC ARTDAVAVEG LTAAIDRARA
YVDAGADMIF PEALADERSF AAFRAAVDVP ILANMTEFGK SPLLTAAQLT DLGVNAVIYP
VTTLRVAMGA IIRGLATLAA EGTQADLVPA MQTRAELYDL LDYAGYGAAD IL
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