| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2646 |
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| Symbol | |
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| ID | 3906319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3121308 |
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| End bp | 3123758 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637879971 |
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| Product | exodeoxyribonuclease V |
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| Protein accession | YP_481737 |
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| Protein GI | 86741337 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.215439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0562763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCAC AGCGCCGTCC CGGATACCAC GCTACCCAGC GGGCTACAAC AGCGGCGGAA
CGGTTCGTCG TTACGCTTCC CGGCATGCCG GACGAGTACA CGACCGCTTC CACCACGGAG
CCCGACGCGG TCGGCCCGCA GGCACGAGCG GACCCGCAGC CAGCGGACCC CGAGGAGGTC
TTCGCCGCGT TCTGCGGGGC GGGGCTGTGG CCGGGGCTGG GCCGCACGAC GGCCGGCCGG
CTGCCCGCGG CCGGGATCAC CCGGCCCGAC CACGTCGACG TCGGCCGGTT GGGCACCGTC
GAGGGGGTCA CCGGGCCGCG GGCCCGGCGG CTCGCCGACA GCTTCCGCGC CGTGGCGGGC
ACGTACGCGG TCGTCGAACT GCTCGTCGCC GCGGATCTTC CGGCCCGGCT CGCGCGCGGG
GTGACCGACC TGCTGGGACC CGCGTCCGCC GACCTCCTGC GGGCCGATCC GTGGATGCTG
CTGACCGCCG CCGACACCGA GATCGCCCAG GCCGACCGGT TCGCCCGCCG CCGCGGTCTG
CAGCGCGACG ATCCGCGCCG GGGCCCGGCG GTACTCACCC ATCTGCTCGG CCGGGCCGCC
TCCCGGGCCG GGGACACCGC GGGCCCCGTG CAGGCGGTGC TGCGTGCCGC CGCGCGCGAG
GGGGTGGCCG ATCCGAGCGC GGCGCTGACC GTGGCGCTCG ACGACGGGCG GATCATCACC
GTCGGCGACC GGATCGCGCT GGAGCGGTAC GCGATGGCCG AGCAGTCCGT CGCGGACGGC
ATCGAACGGC TGACGGCGAC CGCCGAGCCG CTGCGCGCGG GCGCCCCCAG AGCCCGCCGC
CGACCCGATG ACGGGCCTGG GTACGACGGG CCTGGGTACG ACGGGTTGGG ATCCGTCGAC
GACGACGATC CGGCGGGGCG GGCCGTGTCC GCATGGGCCG CCACCGCCCC GCCTCCTACG
GCGCTGACGT TCGACGACGA CAAGGATGAC GACAAGGACG GGGGGGACGA GAGCCCCCTC
GGCGCCGATG GCACCGAGGG GGACACGAAC CGGGACGCCG CCGCGGCGGG CCGCGGCGGA
CCCGCAAACG ACGGCGGACC GGCAAACGAC GAGGTGGTGA CCGGGCTGGA CGAGCTCCAG
CTCGCGGCGG CGCGCGCCGC GCTGGAGTCC GGCGTCAGTG TGCTCACCGG TGGGCCGGGA
ACGGGCAAGA GCCGCACGGT CGCGGCCGTC GTACGACTGG CCTGGGCGGC CGAGGCGGTC
GTCGCACTGG CCGCGCCGAC CGGACGGGCT GCCAAACGCC TCGAGGAGCT GTGCGGGGCG
CCGGCGAGCA CCCTGCACCG GCTGTTGCAG GCCCAGGGGC GCGGCAGCGG GTTCGCGCGC
GGCGAGCACA ACCCGATCGA CGCCGACCTC GTCGTCGTCG ACGAGGCGTC GATGCTCGAC
GCGGAGCTCG CCGCCGCGCT GCTCGACGCC TGCGCGGACG GCACGCACCT GATGTTCGTC
GGGGACCCGG CCCAGCTGCC GAGCATCGGA CCGGGGCAGA TCCTCGCCGA CCTGCTCGAG
TCCGGTGAGG TCCCGGTGAC CGAGCTGCGG CGGCTGTACC GACAGGCTGA CGGCGGCGCC
ATCGCGACGA TGGCCGCCGC GGTACGCGGC GGGGAGCTGC CGCCGCCGGG GCCTGGCCGG
GAGGTCGTGG TGGTGCCGTC CGGCAGCTCC GGCGAGGCTG CGCATCGCAC CGTCCAGCTC
GTCACCAACT CCATCCCCCG CGCGCTCGGC ATTCCCGTCG CGGACATCCA GGTCGTGACC
CCGGTGCACG CCGGTCCGGC AGGCACCACG GCGCTCAACA CCGCGTTGAA GGGCACGCTG
AACCCGGGCG GCGGCGCCGT CTCCGGGTTC GACATCGGGG ACCGTGTGGT GGCCACGGCG
AACCATATCG ACGTCGGGTT CGCCAACGGC GAAATCGGCA CCGTCGTCGC GCTGGGCGAA
CGCGGTGCGC TGCGGGTCGC GTTTCCCGGC GGCGTCGTCG AGGTGCCCGC CGGTGTCCTC
GGTGATCTGC GGCACGGCTG GGCGGTGACG GTGCACCGCG CGCAGGGCAG CGAGTGGCCC
GCCGTCGTCG CCGTGTTCCC GCCGGAGGCC GGCCGGATGC TCACCCGTCC GCTGATCTAC
ACGGCGCTGA CCCGGGCGCA GGCCCACCTG TCGATTGTGG CCGTGAACGG CCCGGCCATC
CGCAACGCCG TGCGGAGCTC GGGCGGACGG CGCCGCACGA CGCTGCTCCC GGCTCTGCTC
GCCGGGCAGA CCGCCGGCGG CTTCGACGAT CCCGACGAAG ATCCCGACGA AGATCCCGAC
GGGGGGCCGG ACGGCAGGCC CGATGGCGGA TCCGACGCGC GGCGGGCGGG CGGCGCGACC
GCTGGGGAGG CAGCCCGCGT ACGGGACGGC GACGAACGGA TGACAGTCTG A
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| Protein sequence | MPPQRRPGYH ATQRATTAAE RFVVTLPGMP DEYTTASTTE PDAVGPQARA DPQPADPEEV
FAAFCGAGLW PGLGRTTAGR LPAAGITRPD HVDVGRLGTV EGVTGPRARR LADSFRAVAG
TYAVVELLVA ADLPARLARG VTDLLGPASA DLLRADPWML LTAADTEIAQ ADRFARRRGL
QRDDPRRGPA VLTHLLGRAA SRAGDTAGPV QAVLRAAARE GVADPSAALT VALDDGRIIT
VGDRIALERY AMAEQSVADG IERLTATAEP LRAGAPRARR RPDDGPGYDG PGYDGLGSVD
DDDPAGRAVS AWAATAPPPT ALTFDDDKDD DKDGGDESPL GADGTEGDTN RDAAAAGRGG
PANDGGPAND EVVTGLDELQ LAAARAALES GVSVLTGGPG TGKSRTVAAV VRLAWAAEAV
VALAAPTGRA AKRLEELCGA PASTLHRLLQ AQGRGSGFAR GEHNPIDADL VVVDEASMLD
AELAAALLDA CADGTHLMFV GDPAQLPSIG PGQILADLLE SGEVPVTELR RLYRQADGGA
IATMAAAVRG GELPPPGPGR EVVVVPSGSS GEAAHRTVQL VTNSIPRALG IPVADIQVVT
PVHAGPAGTT ALNTALKGTL NPGGGAVSGF DIGDRVVATA NHIDVGFANG EIGTVVALGE
RGALRVAFPG GVVEVPAGVL GDLRHGWAVT VHRAQGSEWP AVVAVFPPEA GRMLTRPLIY
TALTRAQAHL SIVAVNGPAI RNAVRSSGGR RRTTLLPALL AGQTAGGFDD PDEDPDEDPD
GGPDGRPDGG SDARRAGGAT AGEAARVRDG DERMTV
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