Gene Francci3_2645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2645 
Symbol 
ID3906318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3120354 
End bp3121181 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content73% 
IMG OID637879970 
Productphosphoglycerate mutase 
Protein accessionYP_481736 
Protein GI86741336 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.13165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0421048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCACAG TCCTGCTGGT CCGCCACGGC CTGACCGCCG TGACCGGCAA GATCCTGCTT 
GGTTGGACGC CCGGCGTGGG GTTGGACGAC CGTGGCCGCC GCCAGGCGTC GGACCTGGCG
CGACGCCTCG CGGACATCCC GCTGGCGGCG ATCGTCAGCA GCCCGCTCGA CCGCTGCCGC
CAGACGGCCG CGGCGATCGC CGGACGCCGT CCGGTCAGCG AGGCCAGCCC GGGCGGTCCG
CGGCAGGTCG AGATCGACGA GCGGCTCGGT GAGTGCCGGT ACGGTGACTG GACCGGGCAG
GAACTGGCGA CCCTGGCGAA GGATCCGCTC TGGGCGGTGG TGCAGAGCCA TCCCAGCGCG
GTCGTCTTCC CCGGTCCCGA GGGTGAGGCA CTACGGGACA CGCAGGCCCG TGGGGTGAGC
GCCGTGCGGG AGTGGAACGA GCGGCTGGGC CCGGACGCCA CCTGGTTGCT GTGCTCGCAC
GGCGACGTGA TCCGCACGGT GGTCGCCGAC GCCCTGGGCA TGCATCTGGA CATGTACCAC
CGGATCACCG TCGATCCCTG TTCCCTGACC GTGATCCGCT ACAACGAGCG CCGCCCCTTC
GTCCGGCGCA TCAACGACAC CGGCGGGGAC GTCGTCGAGC TCCTCCCACC GCCGCTACCC
CGGGCAGAGG GCTCCGCCGG GGCCGCCGAC GCCGCGGCGT CGTCTCCCGG GTCCCGGAAG
TCGCCGGAGC CGCCGGAGTC GCCGGGGTCC AGCGGGCTCG ACGTGGACGA GGTGATCGGT
GGCGGTGCCG GCGGTTTCCG TCCCAGCGCC GGTGGTGGAA CGGGCTGA
 
Protein sequence
MTTVLLVRHG LTAVTGKILL GWTPGVGLDD RGRRQASDLA RRLADIPLAA IVSSPLDRCR 
QTAAAIAGRR PVSEASPGGP RQVEIDERLG ECRYGDWTGQ ELATLAKDPL WAVVQSHPSA
VVFPGPEGEA LRDTQARGVS AVREWNERLG PDATWLLCSH GDVIRTVVAD ALGMHLDMYH
RITVDPCSLT VIRYNERRPF VRRINDTGGD VVELLPPPLP RAEGSAGAAD AAASSPGSRK
SPEPPESPGS SGLDVDEVIG GGAGGFRPSA GGGTG