Gene Francci3_2632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2632 
Symbol 
ID3906305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3106025 
End bp3107059 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content73% 
IMG OID637879957 
ProducttRNA (adenine-58-N(1)-) methyltransferase 
Protein accessionYP_481723 
Protein GI86741323 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.310153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.284093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCC CGCCCGACGA GTCGGTGTCC CCGGGGCAGG TGCCGTCCCT GGCCGGCGGT 
TACGCTCCGC CTCCGACCGG CGCCGCTCAT CGCCGAGGCC TGTTCACCAA GGGTGACCGG
GTGCAGCTGA CTGATCCCAA GGGGCGCCGG CACACCGTCG TCCTCGAACC GGGCAGGCAG
TTTCACACCC ACCGGGGAGC CGTCGAGCAC GACGCCCTGC TCGGCCGGCC GGAGGGGATC
GTCGTCACCA GCACGGGTGG TACCGACTAC CTGGCGCTGC GCCCGCTGCT CGTCGACTTC
GTGCTGTCCA TGCCGCGCGG GGCGACCGTG GTGTACCCCA AGGACGCGGC GCAGATCGTC
ACCTACGCGG ACATCTTCCC GGGCGCCAGG GTGCTGGAGG CCGGCGTCGG GTCCGGGGCG
CTGTCGTGCT CGCTGCTGCG TGCCATCGGC GACTGCGGGC GTCTGGTCTC CTACGAGCGG
CGCGCGGACT TCGCCGAGAT TGCCCGGCGC AACATCGAGG CGTTCTTCGG CGGCCCGCAT
CCCGCCCACA CCGTGCTGGT CGGGGAGCTG GCCGAGACAA CCGAGCGTGA CGTCGACCGG
GCTGTCCTCG ACATGCTCGC GCCCTGGGAG GTCGTTGACG CCGTCAGCGC GGCGCTGGTG
CCCGGCGGGG TGGTCTGTGC CTACGTCGCT ACCACCACCC AGCTTTCCCG GATCGTCGAG
ACGCTACGGG CGCACGGCAC GTTCACGGAG CCCGCGGCGT GGGAGTCGAT AATGCGGGAC
TGGCACGTCG AGGGTCTGGC CGTGCGGCCT GGCCACCGCA TGGTCGGCCA CACCGGTTTC
CTGGTGACCG CGCGGCGCCT CGCCGAGGGG GTCACTCCTC CGGTGCGCCG CCGCCGGCCG
GCGAAGGGCG CGCCGATCGG GATCGATCCC GCCTCCGAGA CCGCCCCCGA GCCCAGGGCC
GAGACCGAGC CCAGGGCCGA GACCGACCGA TCCCGGGACG CCGACCCAGG GTCGGCGACG
ATCCAGCCGA TGTGA
 
Protein sequence
MSAPPDESVS PGQVPSLAGG YAPPPTGAAH RRGLFTKGDR VQLTDPKGRR HTVVLEPGRQ 
FHTHRGAVEH DALLGRPEGI VVTSTGGTDY LALRPLLVDF VLSMPRGATV VYPKDAAQIV
TYADIFPGAR VLEAGVGSGA LSCSLLRAIG DCGRLVSYER RADFAEIARR NIEAFFGGPH
PAHTVLVGEL AETTERDVDR AVLDMLAPWE VVDAVSAALV PGGVVCAYVA TTTQLSRIVE
TLRAHGTFTE PAAWESIMRD WHVEGLAVRP GHRMVGHTGF LVTARRLAEG VTPPVRRRRP
AKGAPIGIDP ASETAPEPRA ETEPRAETDR SRDADPGSAT IQPM