Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2623 |
Symbol | |
ID | 3906296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3097647 |
End bp | 3098276 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637879948 |
Product | TetR family transcriptional regulator |
Protein accession | YP_481714 |
Protein GI | 86741314 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0845142 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACC ACCCCATCCC GGTCCGACCC GGACGCAAGC GCAGCGAGGA GAGCCGGCTG GCCATCCTTG CCGCGGCGAT CGAGCTCGTG GGAGAGGTTG GCTACGCAGG CTTGACGATC GAGGGCATCG CGGCCCGCTC CGGCGCGGGC AAACAGACGA TCTACCGCTG GTGGCCGTCC AAGGCCGACG TGCTGCTTGA CGCGCTGGCC ACCAAGGCCG ACCTGCACGT GCCCATCCCG GACGAGGGCA GTTACACCGC CGACCTGCGT GCCTTCCTCA CGGCTAGCTT CCGGCTGGGC CGTGACCAGC GGGTAGCCGA TGCACTGCGC GCACTGATGG CCCACGCTCA GATCGACGAG GAGTTCCGGG GACGGTTCCG CTCCTCGTTC TTGCAGCGCC GCCGTGACGC GCTCGGGATC ATCCTCGACC GGGCCCGGAC CCGCGGCGAG CTGCCACCCG TCCCTTCCCC TGGCACCGCC GCTGACCTCG TCTTCGGCGT CATCTGGTAC CGGATGCTTG CCACCAGCCA ACCCGTTGAC GAGAATCTGA TCGACGAACT CGTAACCACG CTCACCGAAC CACGACCCGC CGTCGGCACA TCCACTCCAG CAGCGAGGAA GGGCACATGA
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Protein sequence | MTDHPIPVRP GRKRSEESRL AILAAAIELV GEVGYAGLTI EGIAARSGAG KQTIYRWWPS KADVLLDALA TKADLHVPIP DEGSYTADLR AFLTASFRLG RDQRVADALR ALMAHAQIDE EFRGRFRSSF LQRRRDALGI ILDRARTRGE LPPVPSPGTA ADLVFGVIWY RMLATSQPVD ENLIDELVTT LTEPRPAVGT STPAARKGT
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