Gene Francci3_2623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2623 
Symbol 
ID3906296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3097647 
End bp3098276 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content68% 
IMG OID637879948 
ProductTetR family transcriptional regulator 
Protein accessionYP_481714 
Protein GI86741314 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0845142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACC ACCCCATCCC GGTCCGACCC GGACGCAAGC GCAGCGAGGA GAGCCGGCTG 
GCCATCCTTG CCGCGGCGAT CGAGCTCGTG GGAGAGGTTG GCTACGCAGG CTTGACGATC
GAGGGCATCG CGGCCCGCTC CGGCGCGGGC AAACAGACGA TCTACCGCTG GTGGCCGTCC
AAGGCCGACG TGCTGCTTGA CGCGCTGGCC ACCAAGGCCG ACCTGCACGT GCCCATCCCG
GACGAGGGCA GTTACACCGC CGACCTGCGT GCCTTCCTCA CGGCTAGCTT CCGGCTGGGC
CGTGACCAGC GGGTAGCCGA TGCACTGCGC GCACTGATGG CCCACGCTCA GATCGACGAG
GAGTTCCGGG GACGGTTCCG CTCCTCGTTC TTGCAGCGCC GCCGTGACGC GCTCGGGATC
ATCCTCGACC GGGCCCGGAC CCGCGGCGAG CTGCCACCCG TCCCTTCCCC TGGCACCGCC
GCTGACCTCG TCTTCGGCGT CATCTGGTAC CGGATGCTTG CCACCAGCCA ACCCGTTGAC
GAGAATCTGA TCGACGAACT CGTAACCACG CTCACCGAAC CACGACCCGC CGTCGGCACA
TCCACTCCAG CAGCGAGGAA GGGCACATGA
 
Protein sequence
MTDHPIPVRP GRKRSEESRL AILAAAIELV GEVGYAGLTI EGIAARSGAG KQTIYRWWPS 
KADVLLDALA TKADLHVPIP DEGSYTADLR AFLTASFRLG RDQRVADALR ALMAHAQIDE
EFRGRFRSSF LQRRRDALGI ILDRARTRGE LPPVPSPGTA ADLVFGVIWY RMLATSQPVD
ENLIDELVTT LTEPRPAVGT STPAARKGT