Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2620 |
Symbol | |
ID | 3906526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3092801 |
End bp | 3094264 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637879945 |
Product | ATPase |
Protein accession | YP_481711 |
Protein GI | 86741311 |
COG category | [R] General function prediction only |
COG ID | [COG1672] Predicted ATPase (AAA+ superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.186456 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTGGAGG GAGGCGGGGC GGCGGTGGCC TTTGTGAATC GCACCGACGA ACTCGCCGCT CTGGAGGCGT GGTGGCGCTC GACCGACCCC CGGCCGGCGG TGGTGGGGGG ACGGCGACGG GTCGGCAAAA CCGCGCTGTT GCAGCGCTTC GCCCAGGGCC GTCGGTCGGT GTCCCACACC GGAGCCGGTC GGGCGGCAGT TGGGGAACTG GCGCAACTAT CCCGTCAGGC GGCCATCGCG CTACCGGGGC GAATCCGTGA TCTCGCTGCT CGTCCCTATC TCGACTGGGA CGACGCGCTC GACGACCTCG CCGCGGCGGC TGAGCAGGAG CCGCTCCTCG TCATCCTGGA CGAGTTTCCC GAGATCGTCG CCACCTCACC CGAACTGCCC GGAGTCCTGC GGGCCTTCCT CGATCGAACA GCCGGCCGGA CCAGGCTGCG GATGCTCGTG TGCGGGTCGG CCGTGCGGCA CATGACCGCG CTACAGGAGC AGCGGGCGCC TCTGTACGGC AGATTTGATC TGTCACTGTC GCTGCATCCG TTCCGTCCGC ACGAGGCCGC ACTCATGCTG CCCAGCCTGA CGCCATCCGA CCGGGCGCTC GTCTACGGGC TGGTTGGCGG AGTTCCGTTG TATCTGTCGT GGTGGGACCA GGGCGCCGAT CTCGCTGACA ACCTGCTACG GCTGGCCTGC CGGCCCGGGG CGCCGCTGCT CACCGAGGGC CAACTCGTGC TTGCCACCGA GGTGGAGCAC GGTGAATACC CGGCGGCCGT GCTCCACGCG ATCGCCGAGG GCCGCACCCA GTACAACGAG ATCAAGGACT ATATTCGGGC TGAACCGGCC CGTACTCTGG ATCGGCTCGT CGAGCTGCGG CTGGTCGAAC GGCTGATGCC CGTCACCGAA CCAGCGCGCA GCCGTCGGCG CGTCTACCGG ATCGCCGACA ATTTCCTCGC TTTCTATCTC GGCGTGCTGT CTCGGTACCG CGCGGAGATC GAGCGTGGAT TAGGGAAAGC ACTGCTGCCA GTACTGATCG AGAGTCTGGA CGACCATCTC GGCAAACCGT GGGAGGAAGC GTTTCGCGAG CACCTACGCC GACTCGCGGT CGTCGGCGCG CTGGGCAGGG ACATCGTCGC GGTCGGGCCT TATTGGAACG CGGGTGGGCA GAACGAGATC GATGCGGTCG TGCTCGCGGG CAGGGACCGA CACCCGGTTC TGTTCGGCGA GGCGAAGTGG GCGCGCTCTG TTGACGGTCG ACGGATCTCC AGCCGGCTCC TGGAAAAGGC TCACGCTATT ACATCGGCCG TTCCAGCAGC CTCGGAGCGC CAGACAGACG ACGGAGCTGC CGGCCCTGAC AGTGGCGGGA CCGAAGGCTC TGCCCGGGCG CGCCTCGCGC TGTGCGCTCG CGAGGAGATC CGTAACGCGC CGCCAGGATG TCTCACCGTC ACTGCCGCCG ACATCTTCGA TTAG
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Protein sequence | MLEGGGAAVA FVNRTDELAA LEAWWRSTDP RPAVVGGRRR VGKTALLQRF AQGRRSVSHT GAGRAAVGEL AQLSRQAAIA LPGRIRDLAA RPYLDWDDAL DDLAAAAEQE PLLVILDEFP EIVATSPELP GVLRAFLDRT AGRTRLRMLV CGSAVRHMTA LQEQRAPLYG RFDLSLSLHP FRPHEAALML PSLTPSDRAL VYGLVGGVPL YLSWWDQGAD LADNLLRLAC RPGAPLLTEG QLVLATEVEH GEYPAAVLHA IAEGRTQYNE IKDYIRAEPA RTLDRLVELR LVERLMPVTE PARSRRRVYR IADNFLAFYL GVLSRYRAEI ERGLGKALLP VLIESLDDHL GKPWEEAFRE HLRRLAVVGA LGRDIVAVGP YWNAGGQNEI DAVVLAGRDR HPVLFGEAKW ARSVDGRRIS SRLLEKAHAI TSAVPAASER QTDDGAAGPD SGGTEGSARA RLALCAREEI RNAPPGCLTV TAADIFD
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