Gene Francci3_2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2620 
Symbol 
ID3906526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3092801 
End bp3094264 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content68% 
IMG OID637879945 
ProductATPase 
Protein accessionYP_481711 
Protein GI86741311 
COG category[R] General function prediction only 
COG ID[COG1672] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.186456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGGAGG GAGGCGGGGC GGCGGTGGCC TTTGTGAATC GCACCGACGA ACTCGCCGCT 
CTGGAGGCGT GGTGGCGCTC GACCGACCCC CGGCCGGCGG TGGTGGGGGG ACGGCGACGG
GTCGGCAAAA CCGCGCTGTT GCAGCGCTTC GCCCAGGGCC GTCGGTCGGT GTCCCACACC
GGAGCCGGTC GGGCGGCAGT TGGGGAACTG GCGCAACTAT CCCGTCAGGC GGCCATCGCG
CTACCGGGGC GAATCCGTGA TCTCGCTGCT CGTCCCTATC TCGACTGGGA CGACGCGCTC
GACGACCTCG CCGCGGCGGC TGAGCAGGAG CCGCTCCTCG TCATCCTGGA CGAGTTTCCC
GAGATCGTCG CCACCTCACC CGAACTGCCC GGAGTCCTGC GGGCCTTCCT CGATCGAACA
GCCGGCCGGA CCAGGCTGCG GATGCTCGTG TGCGGGTCGG CCGTGCGGCA CATGACCGCG
CTACAGGAGC AGCGGGCGCC TCTGTACGGC AGATTTGATC TGTCACTGTC GCTGCATCCG
TTCCGTCCGC ACGAGGCCGC ACTCATGCTG CCCAGCCTGA CGCCATCCGA CCGGGCGCTC
GTCTACGGGC TGGTTGGCGG AGTTCCGTTG TATCTGTCGT GGTGGGACCA GGGCGCCGAT
CTCGCTGACA ACCTGCTACG GCTGGCCTGC CGGCCCGGGG CGCCGCTGCT CACCGAGGGC
CAACTCGTGC TTGCCACCGA GGTGGAGCAC GGTGAATACC CGGCGGCCGT GCTCCACGCG
ATCGCCGAGG GCCGCACCCA GTACAACGAG ATCAAGGACT ATATTCGGGC TGAACCGGCC
CGTACTCTGG ATCGGCTCGT CGAGCTGCGG CTGGTCGAAC GGCTGATGCC CGTCACCGAA
CCAGCGCGCA GCCGTCGGCG CGTCTACCGG ATCGCCGACA ATTTCCTCGC TTTCTATCTC
GGCGTGCTGT CTCGGTACCG CGCGGAGATC GAGCGTGGAT TAGGGAAAGC ACTGCTGCCA
GTACTGATCG AGAGTCTGGA CGACCATCTC GGCAAACCGT GGGAGGAAGC GTTTCGCGAG
CACCTACGCC GACTCGCGGT CGTCGGCGCG CTGGGCAGGG ACATCGTCGC GGTCGGGCCT
TATTGGAACG CGGGTGGGCA GAACGAGATC GATGCGGTCG TGCTCGCGGG CAGGGACCGA
CACCCGGTTC TGTTCGGCGA GGCGAAGTGG GCGCGCTCTG TTGACGGTCG ACGGATCTCC
AGCCGGCTCC TGGAAAAGGC TCACGCTATT ACATCGGCCG TTCCAGCAGC CTCGGAGCGC
CAGACAGACG ACGGAGCTGC CGGCCCTGAC AGTGGCGGGA CCGAAGGCTC TGCCCGGGCG
CGCCTCGCGC TGTGCGCTCG CGAGGAGATC CGTAACGCGC CGCCAGGATG TCTCACCGTC
ACTGCCGCCG ACATCTTCGA TTAG
 
Protein sequence
MLEGGGAAVA FVNRTDELAA LEAWWRSTDP RPAVVGGRRR VGKTALLQRF AQGRRSVSHT 
GAGRAAVGEL AQLSRQAAIA LPGRIRDLAA RPYLDWDDAL DDLAAAAEQE PLLVILDEFP
EIVATSPELP GVLRAFLDRT AGRTRLRMLV CGSAVRHMTA LQEQRAPLYG RFDLSLSLHP
FRPHEAALML PSLTPSDRAL VYGLVGGVPL YLSWWDQGAD LADNLLRLAC RPGAPLLTEG
QLVLATEVEH GEYPAAVLHA IAEGRTQYNE IKDYIRAEPA RTLDRLVELR LVERLMPVTE
PARSRRRVYR IADNFLAFYL GVLSRYRAEI ERGLGKALLP VLIESLDDHL GKPWEEAFRE
HLRRLAVVGA LGRDIVAVGP YWNAGGQNEI DAVVLAGRDR HPVLFGEAKW ARSVDGRRIS
SRLLEKAHAI TSAVPAASER QTDDGAAGPD SGGTEGSARA RLALCAREEI RNAPPGCLTV
TAADIFD