| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2612 |
|---|
| Symbol | |
|---|
| ID | 3906518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3082556 |
|---|
| End bp | 3083920 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637879937 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_481703 |
|---|
| Protein GI | 86741303 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000110138 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.164551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACCGCC GCATCTTCGG ACTGGAGAAC GAGTACGGCG TCACCTGCGT GTTCCGGGGG
CAGCGACGGC TGTCCCCGGA CGAGGTGGCA CGGTACCTGT TCCGTCGTGT CGTGTCATGG
GGACGTAGCA GCAACGTGTT CCTCAAGAAC GGCGCCCGTC TCTACCTGGA TGTCGGTAGC
CATCCGGAGT ACGCCACCCC GGAATGCGAC TCCGTGCCCG ACCTGGTCAC CCACGACAAG
GCCGGGGAAC GCATCCTCGA GGGCCTGCTC GTCGAGGCCG AACGACGGCT GCGCGAGGAG
GGCATCGCCG GCGACATCCA TCTGTTCAAG AACAACACCG ACTCCGCCGG CAACAGCTAC
GGCTGTCACG AGAACTACCT CGTCGGTCGG CACGGCGAGT TCTCGAAGCT CGCGGACGTG
CTGGTGCCGT TCCTGGTCAG CCGGCAGATC CTGTGCGGCG CGGGCAAGGT GCTGCAGACC
CCGCGGGGCG CGGTGTACTG CATCTCCCAG CGCGCCGAGC ACATCTGGGA GTCGGTGTCC
TCGGCGACCA CCCGGTCCCG GCCGATCATC AACACCCGTG ACGAGCCGCA CGCCGACGCC
GAGCGGTTCC GGCGGCTGCA CGTGATCGTC GGCGACTCGA ACATGAGCGA GACGACCATG
CTGCTCAAGC TCGGGGCGAC CGACCTGGTG CTGCGCATGA TCGAGGCCGG TGTGATGCTG
CGGGACATGA CCCTGGAGAA CCCGATCCGG GCGATTCGCG AGGTCAGCCA CGACATGACC
TGCCAGCGCA GGATCAAGCT GGCCAACGGA CGTGAGGTCA GCGCGCTGGA CATCCAGTGG
GAGTACCACT CCAAGGCGGT CGAGTTCGTG GAGCGCCGCG GCGGGGACGG GGACGAGGTC
GCCAAGCGGG TGCTCGACCT GTGGGGCCGT ACCCTGCTCG CGATCGAGAC CGACGACCTC
GAGCTCGTCG CCCGTGAGAT CGACTGGGTG ACGAAGTACG TGCTCATCGA GCGTTTCCGG
CACAAGCACG GGCTGTCGCT GGCCTCGCCG CGGGTCGCCG AGCTCGACCT GAAATACCAC
GACATCCACC GCGACCGGGG CCTGTACTAT CGGATGGAAC GGGCTGGTCT GGTCGAGCGC
GTCACCCGTG ATCTCGACGT CTTCGAGGCC AAGTCACGCC CCCCGCAGAC CACCCGCGCC
CGGCTGCGCG GCGAGTTCAT CAAGCGTGCC CAGGAGAAAC GCCGGGACTT CACAGTCGAC
TGGGTCCACC TGAAGCTCAA TGATCAGGCC CAGCGTACGG TCCTGTGCAA GGACCCGTTC
CGTTCCGTTG ATGATCGGGT CGACAAGCTC ATCGCCAGTA TGTGA
|
|---|
| Protein sequence | MDRRIFGLEN EYGVTCVFRG QRRLSPDEVA RYLFRRVVSW GRSSNVFLKN GARLYLDVGS
HPEYATPECD SVPDLVTHDK AGERILEGLL VEAERRLREE GIAGDIHLFK NNTDSAGNSY
GCHENYLVGR HGEFSKLADV LVPFLVSRQI LCGAGKVLQT PRGAVYCISQ RAEHIWESVS
SATTRSRPII NTRDEPHADA ERFRRLHVIV GDSNMSETTM LLKLGATDLV LRMIEAGVML
RDMTLENPIR AIREVSHDMT CQRRIKLANG REVSALDIQW EYHSKAVEFV ERRGGDGDEV
AKRVLDLWGR TLLAIETDDL ELVAREIDWV TKYVLIERFR HKHGLSLASP RVAELDLKYH
DIHRDRGLYY RMERAGLVER VTRDLDVFEA KSRPPQTTRA RLRGEFIKRA QEKRRDFTVD
WVHLKLNDQA QRTVLCKDPF RSVDDRVDKL IASM
|
|---|
| |