Gene Francci3_2607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2607 
Symbol 
ID3906513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3078743 
End bp3079066 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content71% 
IMG OID637879932 
Producttwin arginine-targeting protein translocase 
Protein accessionYP_481698 
Protein GI86741298 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01411] twin arginine-targeting protein translocase, TatA/E family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000181166 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0738114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAACC TGGGCACCAC CGAAATCATC ATCATCGCCC TCGTCGTTCT GGTGCTATTC 
GGGTCGAAGA AGCTTCCCGA CGCCGCGCGT TCCTTCGGTC GTTCGCTGCG CATCTTCAAG
GCCGAGACGA AGGGCCTGCG CGAGGATGAC CAGCCCGCGC CCGCGGCGCA GCCGGCCCCG
TTGCCGATCG AGGCCCAGCC GCCGGTGGCC CAGCCGCAGG CCGTCGCGCC CGGTCAGGCC
GTCGCGCCCG GTCAGGTCTC CGCCTCGTCC GTGAACGCCA CCGCGTCCGT GAACGGCACC
GCGTCGGCCG CCGACCGGGG CTGA
 
Protein sequence
MPNLGTTEII IIALVVLVLF GSKKLPDAAR SFGRSLRIFK AETKGLREDD QPAPAAQPAP 
LPIEAQPPVA QPQAVAPGQA VAPGQVSASS VNATASVNGT ASAADRG