| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2606 |
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| Symbol | |
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| ID | 3906512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3077572 |
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| End bp | 3078666 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637879931 |
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| Product | Sec-independent protein translocase TatC |
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| Protein accession | YP_481697 |
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| Protein GI | 86741297 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000011186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0868161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCAGGGT TGCCCACGCC GCGAAGGCTC GTCGCCTCGG TGAACTACCG CCGCACGCGC
ACTGTCGAGG ACAGTCGCAT GCCGCTCACC GAGCATCTGC GTGAGCTGCG CAACCGCGTC
GCCATCGCGC TCCTCGCGTT CGCGATCGCC GGTGTCGTCT GTTTCATCTT CGAGCCGCGC
ATCTTCGACT GGCTCAAGGC GCCGTACTGC GACCTGCCGG CGAGCAAGCG GTTCAGCCCG
GACGGCCTGG CGGCGAACGA CTGCACCCTG TACTTCTTCG GCATCCTCGA CGCGTTCACT
ATCCGCCTGA AGATCTCCAT GATCGCCGCG GTGGTGGTCT CCTCGCCGGT GTGGCTGTAC
CAACTCTGGT CCTTCATCAC CCCTGGTCTG CACCGTCATG AGCGGCGCTG GTCGTTGACC
TTCGTCGGTG TCTCCCTCGT CCTGTTCGCC ACCGGTGCGG TCTTCGCCTA CCTGACGTTG
TCGACCGGGC TGGGCCTGCT GCTCGGCTTC GGCGGCAACG GGCTGGTCAG CGTCCTGGAC
GGCAACCGGT ACCTCAGCTA CGTCCAGGCG ATGCTGCTGA TCTTCGGACT GTCGTTCGAG
GTTCCGCTGC TCGTCATGAT GCTGAATCTG GCCGGGATCG TCAGCACCGC CAAGCTGCGC
TCCTGGCGGC GGCCCGAGAT CTTCCTGGTG TTCGTGTTCG CCGCGGTCGT CACCCCCAGC
CAGGACCCGT TCACCATGCT CGCGCTGGGC CTGCCCATGG TGCTCCTCTA CGAGGTCGCG
CTGATCATCG GCTGGCTGAA CGACCGGCGG GTGGCCCGCC GCGGGGACAC CTCCCCGTAT
GCCGACCTGG ACGACGACGA GACCTCCCCG CTGGACTTCG ACGACGCCCC GCCCCGCCCG
GCGGCCTCCG CGGGCCCCGC GGCGACGGCC ACGTCGCCCG GCACGGCGAA CCCGCCCGGC
ACGGCGAACC CGCCCGGCAC GGCGAACCCG GTCGGCACGG CGAACCCGGT CGGCACCGGG
TCGTCAACAC CCGTCGGCGC GGGGACGGCC CCCGTCTCCC CAAGCACCGA CGTCACCCAC
GGCGACATCA CCTGA
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| Protein sequence | MPGLPTPRRL VASVNYRRTR TVEDSRMPLT EHLRELRNRV AIALLAFAIA GVVCFIFEPR
IFDWLKAPYC DLPASKRFSP DGLAANDCTL YFFGILDAFT IRLKISMIAA VVVSSPVWLY
QLWSFITPGL HRHERRWSLT FVGVSLVLFA TGAVFAYLTL STGLGLLLGF GGNGLVSVLD
GNRYLSYVQA MLLIFGLSFE VPLLVMMLNL AGIVSTAKLR SWRRPEIFLV FVFAAVVTPS
QDPFTMLALG LPMVLLYEVA LIIGWLNDRR VARRGDTSPY ADLDDDETSP LDFDDAPPRP
AASAGPAATA TSPGTANPPG TANPPGTANP VGTANPVGTG SSTPVGAGTA PVSPSTDVTH
GDIT
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