| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2605 |
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| Symbol | |
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| ID | 3906511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3074409 |
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| End bp | 3077489 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637879930 |
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| Product | DSH-like |
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| Protein accession | YP_481696 |
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| Protein GI | 86741296 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.022552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.122557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCTCCA CGCCCGAGAT TCTTGTGGAG TTCGCCGCTG GCCTCCCCTT CGGACTCGAC
CCGTTCCAGT TCGAGGCGGT CGCGGCGCTG GCTGCCGGTG AAGGGGTGCT CGTCGCGGCC
CCGACGGGAG CGGGTAAGAC GGTTGTCGGC GAGTTCGCCG CCCATCTCGC CCTGCGCACC
GGGACGCGTT GCTTCTACAC GACGCCGATC AAGGCGCTGT CGAACCAGAA GTACGCCGAT
CTCGTCTCCC GCTACGGCGC CGTCTCGGTC GGCCTGCTGA CCGGGGACAC CTCCCGCAAC
GGCGACGCCC CGATCGTGGT GATGACCACC GAGGTCCTGC GCAACATGCT CTACGCCGGC
CCGGTCGACA ACGGCCGGCT GGACGACCTC GGCTATGTCG TCATGGACGA GGTGCACTAC
CTCGCCGACC GCCAGCGCGG CGCCGTGTGG GAGGAGGTCA TCATCCATCT GCCGGCGCAG
GTCCGGCTGG TCTCCCTGTC CGCGACGGTG AGCAACGCCG AGGAGTTCGC CGAGTGGCTG
GTCACGGTGC GCGGCCATAC CCGGGTCATC GTCAGCGATC ACCGTCCCGT TCCGCTGTGG
CAGCATGTGC TCGCTGACCG CACCCTGTAC GACCTGTTCC TCGAGGACAC TGCCGGCACC
CCGCCGCCGG GCGGACCCGA GGCACTTCGT GCCACCCTGG ACGGTGATCT CGTCCGGTCG
AGGTGGAACG TCGGGGTCGA AGCCGGATTC GAGGTAGCCG GCACCCGGCG CGCCACCATC
GGCGACCGGG ACCGCGGCGG CGACCGGGAC CGCGGCGGCG ACCGGGACCG CGGCGGCGAC
CGGGACCGCG GACGGGGGCG GGGCGGCAAC CGCAACGGCG AACGGGGCCG GGCCACCCAG
GGTGGTCGCG GTGGCGACCG TGGCCGCAAT GGGGGTGCCG GCCAGGCGCC CGTGGCAGCC
ATCCCCGCGG CCCGTGGTGG TCCGACGGCG GTCGGTGGAC GAGTGGTGAA CCCGGACCTG
CTGCGGCTGG CCCGCGAGGA GAGCCGGGCG CTGTCGGGGG GCTCTCCCGC GGTCGGCCGC
GGTCGGCCGG CGCCCGGCGC GCGCCGGCGG ACGTGGGTGC CGGGCCGGCC GGAGGTCGTC
GAACGGCTCG ACCGCGACGG CCTGCTCCCG GCGATCGTCT TCGTGTTCAG CCGGGCCGGC
TGCGATGCGG CGGTCACCTC CTGCGTGCGT GCGGGTCTGC GGCTCGTCGG CCCCGCGGAG
CAGCAGCGGA TCCGGACCCT GGTCCGGGAA CGCACCGCCG GGATCCCCGA GACCGACCTC
GCCGTGCTCG GCTACTGGGC GTGGCTGGAG GGGCTGGAAC GCGGCATCGC ATCCCACCAC
GCCGGCATGC TGCCAACCTT CAAGGAGATC GTCGAGGAGC TGTTCGTCCA GGGGCTGGTC
CGGGTGGTCT TCGCCACGGA GACCCTGGCG CTCGGCATCA ACATGCCCGC CCGTACCGTC
GTGCTGGAGC GGCTGACGAA GTTCAACGGC GAGAGCCGCG TGGACATCAC CCCGGGGGAG
TACACCCAGC TGACGGGCCG CGCCGGGCGG CGCGGCATCG ACGTGGAGGG CCACGCGGTC
GTCCTGTGGC AGCCGGGGCT GGATCCGCTC GCGCTCGCGG GGCTGGCCTC CACGCGGACC
TATCCGCTGC GCTCGTCGTT CCGGCCGTCG TACAACATGG CCGTCAACCT GGTCGGCAGG
CTCGGGCGGG AGCGGGCACG CACCGTGCTG GAGTCGTCGT TCGCGCAGTT CCAGGCCGAC
CGGGCCGTGG TGGGCCTGGC CCGGGCGGTG CAGCGCAACA CCGAGGCGAT CGACGCGAAG
CGTGAGGCGT TGAGCTGCGA CAAGGGTGAC ATCGGCGAGT ACGACCGGTT GCGCCGGGAG
ATCGCTGAGC GGGAGGCCGC GCTGTCGCGG GAGGGTTCGG CGCGCCGGCG GGCCGAATCC
GCGGCGGCGC TCGCCCGGCT GCGGACCGGG GACATCGTGC GGGTGCCCGC CGGGCGGCGC
AGTGGGCTCG CTGTCGTGCT CGACGCCGAC GCCGCCGCGA ATGCCGCCGA CGGCCCGCGG
CCGGTGGTGC TCACCGCGGA CAGGCAGGTT CGCAGGCTGT CCCTGACCGA CTTCCCGATC
GCCGTCGAAC CGCTCGGCCG GGTCCGGGTG CCGCGGTCGT TCAACCCGCG CTCGCCGCAG
TCACGCCGGG ATCTGGCCTC CTCCCTGCGC GCCGCCGACG TCAACCCCGA TGCCCCTCCG
GGCCGGCGGG CCAGGGTCCG TTCGGCCGCG GCGGACGACG CCGAGCTCGC CCGGCTGCGC
CGGGCCCTGC GCGCCCATCC GGTGCACGAC TGTCCGCGCC GCGAGGAGCA CCTGCGCTCC
GCCGAGCAGG TCAACCGGCT GGTCAAGGAG ACCGCCGCGA TCTCACGGAA GGTGGAGGGC
CGGACGAACA CGGTCGCGAA GACGTTCGAC CGGGTCCGCG CCGCGCTCGA GGACCTCGGC
TACCTGGACG GGGACCGCGT CACCGCCGCC GGGCGGGTGC TCGCGCGCAT CTACTCGGAG
CAGGACCTGC TCGTCGCCGA ATGCCTGCGC GCCGGCATCT GGGACGATCT CACCCCGCCG
GCGCTGGCCG CCGCCGTGTC CACGCTGGTG TTCGAGCCGC GCGGTGACGA CGCCGGCGTC
CCGGCGCTGC CGGGCGGCGC GGCGCTACGC GACTGCCTCG CCGAGATGGT CCGGCTGTCG
GAGCGGCTCG CCGAGGCCGA GCAGGCCCAC CGGCTCGCGT TCCTGCGCCC GCCCGAGCTC
GGATTCGTCG CCGTCGCGCA CGACTGGGCC GCGGGCCGCA CGTTGGAACG GGTGCTGACC
GACAGTTCCG TGGAACTGAC CGCCGGCGAT TTCGTCCGGT GGATGCGCCA GCTCATCGAC
ATCCTTGACC AGATCGCGCA GGTCGCTCCG ATGGTGCAGG CGGACCCGGG AACGCCGGAC
GGCGCGCGGG TGCGCCGGAC CGCCCGGGCG GCGATGGACG CCGTCCGTCG CGGGGTCGTC
GCGTACGCGA TGAGCGTCTG A
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| Protein sequence | MSSTPEILVE FAAGLPFGLD PFQFEAVAAL AAGEGVLVAA PTGAGKTVVG EFAAHLALRT
GTRCFYTTPI KALSNQKYAD LVSRYGAVSV GLLTGDTSRN GDAPIVVMTT EVLRNMLYAG
PVDNGRLDDL GYVVMDEVHY LADRQRGAVW EEVIIHLPAQ VRLVSLSATV SNAEEFAEWL
VTVRGHTRVI VSDHRPVPLW QHVLADRTLY DLFLEDTAGT PPPGGPEALR ATLDGDLVRS
RWNVGVEAGF EVAGTRRATI GDRDRGGDRD RGGDRDRGGD RDRGRGRGGN RNGERGRATQ
GGRGGDRGRN GGAGQAPVAA IPAARGGPTA VGGRVVNPDL LRLAREESRA LSGGSPAVGR
GRPAPGARRR TWVPGRPEVV ERLDRDGLLP AIVFVFSRAG CDAAVTSCVR AGLRLVGPAE
QQRIRTLVRE RTAGIPETDL AVLGYWAWLE GLERGIASHH AGMLPTFKEI VEELFVQGLV
RVVFATETLA LGINMPARTV VLERLTKFNG ESRVDITPGE YTQLTGRAGR RGIDVEGHAV
VLWQPGLDPL ALAGLASTRT YPLRSSFRPS YNMAVNLVGR LGRERARTVL ESSFAQFQAD
RAVVGLARAV QRNTEAIDAK REALSCDKGD IGEYDRLRRE IAEREAALSR EGSARRRAES
AAALARLRTG DIVRVPAGRR SGLAVVLDAD AAANAADGPR PVVLTADRQV RRLSLTDFPI
AVEPLGRVRV PRSFNPRSPQ SRRDLASSLR AADVNPDAPP GRRARVRSAA ADDAELARLR
RALRAHPVHD CPRREEHLRS AEQVNRLVKE TAAISRKVEG RTNTVAKTFD RVRAALEDLG
YLDGDRVTAA GRVLARIYSE QDLLVAECLR AGIWDDLTPP ALAAAVSTLV FEPRGDDAGV
PALPGGAALR DCLAEMVRLS ERLAEAEQAH RLAFLRPPEL GFVAVAHDWA AGRTLERVLT
DSSVELTAGD FVRWMRQLID ILDQIAQVAP MVQADPGTPD GARVRRTARA AMDAVRRGVV
AYAMSV
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