| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2604 |
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| Symbol | cobD |
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| ID | 3906510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3073305 |
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| End bp | 3074405 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 637879929 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_481695 |
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| Protein GI | 86741295 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0562249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0827399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCCCTT CCCGTGCCGT GGTCCCTTCC CGTGCCGTGC GCGCGTTCGG TCTGGTCCTC
GGTGCCGTGC TGGACGGGCT GCTCGCCGAC CCGGCGCGGC TGCATCCGGT CGCCGGGTTC
GGGCGGGCCG CGTCCCGGCT GGAGAACCGG CTCTACCGGG ACGGCCGGGC GCCCGGAGCG
CTGCACACCG CGGTGCTGCT AGCCGCGGTC GCCGTGCCCG CCGTCGCTGC TGAACGCGCT
GCTGAACGCG CTGCTGAACG CGCTGCTGAA CGCGCCGCTG AACGCGCCGT CGCGCTCACG
GCGGTGGTCA CGTGGACCGT CCTCGGTGGC GCCTCGCTGC GCCGTCAGGG CCGACGCCTC
GGCGAGGAGC TGCGCGCCGA CGATCTCGCC GCGGCCCGGG AACGGCTCCC GGCGCTGTGC
GGACGCGATC CGGCGTCGCT GGACGCCGCC GGGATCGCCC GCGGCGCGAT CGAGTCCATC
GCCGAGAACA CCTCCGACGC GCTGGTCGCC CCGCTGTGGT GGGGGGCGCT CGCCGGCCTG
CCCGGCCTGG TCACCTACCG GGCGATCAAC ACCCTTGACG CGATGATCGG ACACCACAGC
CCCCGGTACG AACGCTTCGG CTGGGCGGCG GCGCGCCTCG ACGATCTGGC GAACCTACTC
CCGGCGCGGA TGTGCGCGCT GGTGACCTGC GCGTGCGCCC CGGTCGTCGG CGGTTCGGCG
GTCGACGCGT ACTGGGTCAT GCGCCGGGAC GGCCGGTCGC ATCCCAGCCC CAACGCCGGG
ATGGTGGAGG CCGCGTTCGC CGGGGCGCTG GGGCTGCGGC TCGGGGGAGA GCTGCGCTAC
CCCTACCGCG TCGAGCACCG GCCGGAGCTC GGGTTCGGCC GGCGGCCGCA GGGCGCGGAC
GTCGCAGCCG CGGCCCGGTT GTCCGCGGCG GTGAGCGTGG TCTGTGTCGC GCTGACGGCG
GCGGCGGCTC CGGTGGCGCG GCTGGTCACC TCCGCCCTGA CCGCGCGCCT CGGCCTCGGT
ACCGGATCCG GACGCGCTGG CTCCGGGGGC GCTGGCTCCG GGGGCTCTGG TGGGCCCGGG
AGAAGAGAGC GCCGCCGGTG A
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| Protein sequence | MVPSRAVVPS RAVRAFGLVL GAVLDGLLAD PARLHPVAGF GRAASRLENR LYRDGRAPGA
LHTAVLLAAV AVPAVAAERA AERAAERAAE RAAERAVALT AVVTWTVLGG ASLRRQGRRL
GEELRADDLA AARERLPALC GRDPASLDAA GIARGAIESI AENTSDALVA PLWWGALAGL
PGLVTYRAIN TLDAMIGHHS PRYERFGWAA ARLDDLANLL PARMCALVTC ACAPVVGGSA
VDAYWVMRRD GRSHPSPNAG MVEAAFAGAL GLRLGGELRY PYRVEHRPEL GFGRRPQGAD
VAAAARLSAA VSVVCVALTA AAAPVARLVT SALTARLGLG TGSGRAGSGG AGSGGSGGPG
RRERRR
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