Gene Francci3_2580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2580 
Symbol 
ID3904072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3045741 
End bp3045950 
Gene Length210 bp 
Protein Length69 aa 
Translation table11 
GC content69% 
IMG OID637879905 
Producthypothetical protein 
Protein accessionYP_481671 
Protein GI86741271 
COG category 
COG ID 
TIGRFAM ID[TIGR02276] 40-residue YVTN family beta-propeller repeat 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.157047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.848378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCC ACGCCTATGT GGCCAGCATC CGAACTGGGC AGGTGCTGGT GGTCGACCCG 
CTCGCGGGTG TCGTGAGCGC CGCCATCGGA GTCGGCGTGC TCCCCTTCGG AGTGGCGGTG
GCTCCCGACG GCAGCCGTGT CTACGTCACC AACTTCGGTG GGAACGACGT GTCCGTCGTC
GACACGGCCA CCGGGGCCGT CACCGGCTGA
 
Protein sequence
MTIHAYVASI RTGQVLVVDP LAGVVSAAIG VGVLPFGVAV APDGSRVYVT NFGGNDVSVV 
DTATGAVTG