Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2551 |
Symbol | |
ID | 3904042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3014471 |
End bp | 3015709 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637879878 |
Product | recombinase |
Protein accession | YP_481644 |
Protein GI | 86741244 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTACGAGG GCGCCCTGGA GGACTTGAAG CGGGGAGCCA CCAAAACCGG CAAGCCCCTT GACGGCCTCA TCGTCTCCGA CGTGGACCGG CTCACCCGCG ACCCGCGCCA CCTGGAAGAC GCCATTGACG TGGTGGTCCA GTACGGGCGG CCCGTCATTG ACATCAGCGG CACCCTTGAC CTCCTCACGG ACAACGGGCG CTCCGTGGCC CGGATCGTCG TGGCCCTGAA GAACCAGCAG TCCGCCGACA CCTCCCGGCG GGTGCGGACG GCCCACCGCG AGCTCGCCAA GGCGGGTGTC CCCGTGGGCG GCTACCGGCC CTTCGGCTGG GAGCCGGACA AGCGCACCAT CCGCAAGGCC GAGGCCGACA TGATCGTCGT CGGTGCTGAC GAAATCCTTG CCGGGGTCGG CACGCACACG CTCTGCCGCC GCTGGAATGA GCTGGGCATT CTCACGACCC GGGGCCACCA GTGGCAGCGC CAGGTGATGA AGAACATGTA TCTGTCTCCC CGCCTCGCGG GCTACCGGGT ACACGGCCCG ACCACGGTTC CCTTGGAGCA GCGCTACGCC TGCACCGTAG ACGGCCAGCC CGTCATGGGC CTTCAAGGTC ACATCCTGGA CGTCGAGGTC TGGGAGAAGG TGGTGGCGAA GCTCCGCGAC CCCGCTCGGA CCGGCAACCA GAACATCCAC ATAGGCGGCC GGAAGTATCT GCTGTCCGGA ATCATCCGCT GCGCCTACTG CGGCGCGCGG CTCACCGGCG GCTGGGACAA GGGGTGGAAG AAGCATCACT ACTCCTGCCG TCCCGTCACC GCTGGTGGCT GCGGCAGCGT CGCCGTGACC GGCCACCACG TTGACGAACT GGTCACGAAC TTGGTGCTGG CCTATCTGGC AAACCGGGAC GTGGAAGCCG AAAGCGGCCC GTGGCCCAAG GCGGCCGAGG CGGAGATCGC CGAGATCATG GCCGCCTGGC GGGAGACGAA GCGCGGCGGC ACCCGCGCCC TCCAGATGGT GGAGGAGCTG GAGGGGGACG TGGCGAAGCT CCGGGGGGAG CGCAACGACT GGCTGCGCGC CCACTCCGGC CCCCAGCTGA CCAACGTGGC CTCGTCCTGG CCTCGGCTGG AGGTGGAGCA GCGCCGTGAC ATCATCGCCA CCGTTATCGA GGCCGTGGTG CTGTCCAAGG CCGATGGGCC GAAGAACCGT TTTGACCCGG ATCGCATCAC CGTGATCTGG CGTCCCTGA
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Protein sequence | MYEGALEDLK RGATKTGKPL DGLIVSDVDR LTRDPRHLED AIDVVVQYGR PVIDISGTLD LLTDNGRSVA RIVVALKNQQ SADTSRRVRT AHRELAKAGV PVGGYRPFGW EPDKRTIRKA EADMIVVGAD EILAGVGTHT LCRRWNELGI LTTRGHQWQR QVMKNMYLSP RLAGYRVHGP TTVPLEQRYA CTVDGQPVMG LQGHILDVEV WEKVVAKLRD PARTGNQNIH IGGRKYLLSG IIRCAYCGAR LTGGWDKGWK KHHYSCRPVT AGGCGSVAVT GHHVDELVTN LVLAYLANRD VEAESGPWPK AAEAEIAEIM AAWRETKRGG TRALQMVEEL EGDVAKLRGE RNDWLRAHSG PQLTNVASSW PRLEVEQRRD IIATVIEAVV LSKADGPKNR FDPDRITVIW RP
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