Gene Francci3_2543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2543 
Symbol 
ID3904687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3005612 
End bp3006751 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content67% 
IMG OID637879870 
Productradical SAM family protein 
Protein accessionYP_481636 
Protein GI86741236 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCT TCCTTGATCT TCCCCACCTG CGCCCGAGGG ACGACTATGG CCACGCCCGG 
ATGCCGCGCC GGGCTGACGC ACCTGCCCCG GAACACATTG ACCGGATCGC CTACGGCCGG
TTCCGGAATG TGTACCTCTA CATCACCGAG GCCTGTCAAC TGCGCTGTGA ACACTGCTAC
ATGGGCGAAC GACTGGAGCG CGCCTTGAAG ATGCCGTTGC CCCAGATCAC GGAGACGCTG
CGGACCTGGC GACGGATGGG CGGCAGCAAG CTGACCATCC TGGGCGGGGA GCCGACGCTT
CACCCCAACT ACATCGAGGC CATCCGGCTC GGGCGGCAGC TGGGGTACGA GGACGTCATC
ACCACCACGA ACGCCCAGAA GCCCGCGGCA CGGAAGTTCC GCCAGCTGGA ACCGGCGGAC
TTCGCCTACG TCCAGGTCAG CCTCGACGGC GGGAGCGCCG CCACCCACGA CCAGGTACGC
GGCGAGGGCA CCTTTGACGT GGCTCTGGAG ACGACGGCGG AGCTGGCCGG ACGCGGCTTC
GACACCCGGA TCATCTGCAC CGTCAACCGG GCCAACCGGG GCGACGCCCT GAAGCTGTTG
GACCTGGCCG ACGAGATCGG CGTGTCCCTC GTGAAGTTCC ACGTCTTCTC CACCATCGGC
ACCGGCCACG GCAACGCCGA CATGGCGATG GGTCCATCAG CCTGGGTGAC GTACTGCGAC
GTCATCAACC AGGTGGCCCC GGCCTACAAA ACCCGGGTCT GGTACCAGCC CACCTACGCC
CGGCGAAACC AGATGAGCCG CTATGCGGCG GAGGGATACC AGGGGTGCAT CGGCCGGACG
CTGGACCGCA TTTCGATCTT TCCCGACGGG CGCTGCTACG TCTGTTCGTA CCTGTTCGAC
ACGGACCTCA ACTTCGCCCG GATGCAGGAC GGGCAGGTGG TGTTGAACCG CGAGGCCAAC
GAGTTCGACC TGTTCACCCA ACCGCTGATG ACGAGCGCGT GCGGCGGGTG CAAGGCCTCC
GCCTGCCAGG GCGGTTGCCC CGCCGAGGAA GTCGTCATGG GCGGCTCCTC CTGCGCCGCG
GAGCCGGACA TCGTGCCGGT GTGCCGGTTG TGGAAGTCGT CCGCCAAGCC CGAGGACTGA
 
Protein sequence
MTTFLDLPHL RPRDDYGHAR MPRRADAPAP EHIDRIAYGR FRNVYLYITE ACQLRCEHCY 
MGERLERALK MPLPQITETL RTWRRMGGSK LTILGGEPTL HPNYIEAIRL GRQLGYEDVI
TTTNAQKPAA RKFRQLEPAD FAYVQVSLDG GSAATHDQVR GEGTFDVALE TTAELAGRGF
DTRIICTVNR ANRGDALKLL DLADEIGVSL VKFHVFSTIG TGHGNADMAM GPSAWVTYCD
VINQVAPAYK TRVWYQPTYA RRNQMSRYAA EGYQGCIGRT LDRISIFPDG RCYVCSYLFD
TDLNFARMQD GQVVLNREAN EFDLFTQPLM TSACGGCKAS ACQGGCPAEE VVMGGSSCAA
EPDIVPVCRL WKSSAKPED