Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2538 |
Symbol | |
ID | 3904682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3001759 |
End bp | 3003063 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637879865 |
Product | putative DNA-binding protein |
Protein accession | YP_481631 |
Protein GI | 86741231 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCGGGT GGCTGGGCCT GACACAGGCG CAGCTCAGCC GGATAGAGAA CGGCCGCGCC CCCGAAGAGC TGACCAAGCT GATTCGCTAC AGCCAAATCC TCGGCATCCC GGGGGAACTG CTCTGGTTCG ACCGTCCCGG GGAGCCGCGC ACCCGGGCCA CCGGAGGGAG CCAGGCGCCG GCGCTCACCG TGCCGGTCAT CGTCGGCGGG CAACAGGTGG CGCTTCCCAT TGACCGCGCC GCCGCGCACT CCCACGGCCT CACTGATCTG GTCGCGGAGC TGGCTTCGGA CTCTGGCGAG GCGGGCGCGC CCCAGGTGCC GATGCCCCGG GGGGAGCGGG CCGCGCCCGG GTCGGCCCAC GTCGTCCCAC TGGCGAGCCT AGAGGAAATG CAGCACTTGG CCGCCGCGAT GCAGGACGCG GGCCGCTACC TGGATGAGAC GGTGGTGGGC TACTTCGGCC AGCAGTTCAC CCGGTGCAAG GCCAACGACG GCCAGATGGG GCCGCTCCGG GCGCTGCCCC TGGTGTTGGG CGTCCTCGAT GCCATCCAGT CCCGCGCCCG GGATGTCCGC CCCCAGGTGC GGCGCGCTCT CCTCAGCGTC GGGGCAGACG GGGCAGAGTT CGCGGGCTGG CTCTACCGCG ACTTGCACGA CGCTACGTCG GCGGCCTACT GGTACGACCG GGCGATGGAG TGGGCGCAGG AGGCCGGGGA CCTGCCAATG CAGGGCTACA TCCTGCTTCG TAAGTCCCAG TCCGCCTATG AGGACCGTGA CGCGACGCGG GTGCTTACCC TCGCCCAGGC GGCGCGCTAC GGGCCGTGGA ACCTGCCGCC CCGGGTTCAG GCAGAGGTCA CGCAGCAGGA GGCACGCGGT CTGGCGATGA CCGGCGACCC CATCGGCGTC GTGGAGCAGA AGCTTGACGA AGCTCGCGCG CTGCTGGGGG CGGCCGACGA CGACCCGGAT TCCCTGGGGG CCGGGTACGA CGAAGGAACC TGGTTGTTGC GGTCGGCCAC CTGCTACATC GAGGCGGGAA AGCCGGGCCG GGCCGCGGCC CTCTACGGCG AAGTCCTGGC AACCGGCGCG CTGTCCCGCC GGGACGAGGG CTACTACCGG GCACGCCGGG CTGTCGCTCA TGCGTTAGGC GGCGAGCCTG ACGCCGCCGC CGAGGAAGGC CTGACCGCCC TGCGGCTGGC GACGGCCACC GGCTCCAGCC GCACCACCCG GGAGTTGACG CGGGCCGCCC AGATATTGAC GCCCTGGCAG ACCCGGCCCG GTCCCCGCCA GCTGCGCGCC GCCCTGCTGG TCTAA
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Protein sequence | MGGWLGLTQA QLSRIENGRA PEELTKLIRY SQILGIPGEL LWFDRPGEPR TRATGGSQAP ALTVPVIVGG QQVALPIDRA AAHSHGLTDL VAELASDSGE AGAPQVPMPR GERAAPGSAH VVPLASLEEM QHLAAAMQDA GRYLDETVVG YFGQQFTRCK ANDGQMGPLR ALPLVLGVLD AIQSRARDVR PQVRRALLSV GADGAEFAGW LYRDLHDATS AAYWYDRAME WAQEAGDLPM QGYILLRKSQ SAYEDRDATR VLTLAQAARY GPWNLPPRVQ AEVTQQEARG LAMTGDPIGV VEQKLDEARA LLGAADDDPD SLGAGYDEGT WLLRSATCYI EAGKPGRAAA LYGEVLATGA LSRRDEGYYR ARRAVAHALG GEPDAAAEEG LTALRLATAT GSSRTTRELT RAAQILTPWQ TRPGPRQLRA ALLV
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