| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2523 |
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| Symbol | |
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| ID | 3904667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2982679 |
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| End bp | 2984442 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637879852 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_481618 |
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| Protein GI | 86741218 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGATC GGTCAAGACC GTCTCGGCGA GCCGGACGGG CCTCGGGGCT TCGCCTCAAC
GGTGGGGAAG GAGCCTCGCT CGAGCGGCTG CGCGAGCGGT TCCTCACCGC CGGGATCTCA
GCTGAGATCT CGGCTGAGAT CTCGGCTGAG ACCAGCGAGT CCGGTGGGGT GCGGGATCCG
ATCCGCGAGT CGTGGATGCG GTCGCGGCGG TGGGCGGTGG CCGCGGACAG CCCCGAGCCC
CTCCTCGCCG CGTCGGACCT TGACGTACCT GTCGCGCGCG CGGCCGAACC GGTCCTGTGC
CAGCTCGCCG ATCGGCTGGC CAGGCAGGCC GTCAGCGCGA TCGTCACCGA CGCGAACGGT
CTGGTGCTCA TGCGGTGCAC CGGCGACGCC GCATTCGAAC GCCGGCTGGA CCGCGTATCG
CTGCTGCCCG GATTTAGTTA TGCCGAGCGG TTTGTCGGCA CCAACGGCAT CGGTACCGCT
CTTGAGGAGC ACAGGCCGGC GCACGTGTTC GGTCAGGAGC ACTACGCGGA GTCCCTCGGC
GAGTTCGCCT GCGCCGGTGT TCCCCTGCGT GATCCGGTGA CGGGGCAGAC GCTGGGCCTG
TTCGATCTCA CCTGTCCGCG CCGGGATGCC GGGCCGCTGC TGGCGGTCAT GGCGGGCATG
GTCGCCAACC AGATCCAGGA TGTCCTGCTT CTCGCCGTGC CGGGGCACGA CCGGGAACTG
ATCTCGCTTC GCGAGGCCGA CGCGGCGGAG TTGCGCAGGC TGCTGATGGC CGAGCGCCAG
CAGCGGGAAC TGGCCGAGAC GATGCACCGG GTCGTCGTCG AGACCACCAG GGCGGTGACT
CCGCCGGAGA TCCTCGGGCG GGTCATGACG GCGGCTGCCG CGCAGCTTCC GTGCGAGGCG
GCGTGGGCGC TGGCCCGGGA ACCGTGCGGA ACGTTGCGGG TCGTGGCGGT CCACGGCCAG
GTGGATACCC GGGCGGTCGG GGCGATGATC GTCCCGCTTC CGGATTCCCC TCTGCTGCTG
GCGTTCCACG GCGGTGGGAT GATCGGGCCG CACCGGAGGC TGCCGGAGGT GCTCCCCGGC
CAGCGCTACC CGGTGGGCAG CTGGCTGGCC GTGCCGGCGC TGTGCCGGCC GGCCCCCACC
GTCGTCGTTC TGATCGCCTC GCGGGCTGCT GGTGGCTACA ATCCCAGGCA GGCTCGTCTG
GCTTATGCCG TGCTGGGCCA GGCGGCGGCG GCCTGTGAGA ACGCCTACCT GTTCGAGGAG
ACGCAGCGGC TTGCGGACAG TGATCCGCTG ACGGGGCTGG CGAACCGGCG TCATTTCTTC
GAGCAGGCCG ATGCTCTGGT CCGCGGGCAT CTGCATGCGG CGCGGTCGCT GGCTGCCTTC
ATGATCGATA TTGATCATTT TAAGCAGGTC AACGACGGTC ACGGTCATGC TGTGGGTGAC
GCGGTTCTCG CCGAGGTCGC TCGGCGCGTG CAGGGCACGC TGGGCCCGCA GGACATCGTC
GGCCGTATCG GCGGCGAGGA GTTCGCGGCC GTGCTGGGCT GCCCGGCTGC GACGGCGGGT
GTTCTCGCCG AGCGGCTTCG GCAGGCGATC GGGGCCAGCC CGGTGGCTAC CGCCGACGGT
CCGCTCCCGG TCACCGTCAG CGTGGGGGTG GCGATGCTGA ACCCGGACGA TTCCGGGCTT
GGCGACCTGC TCATCCGCGC CGACGTGGCC CTCTACCAGG CAAAGCGCTC CGGCCGGGAC
CGGGTCGCGA CCGCGCAGCC ATGA
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| Protein sequence | MPDRSRPSRR AGRASGLRLN GGEGASLERL RERFLTAGIS AEISAEISAE TSESGGVRDP
IRESWMRSRR WAVAADSPEP LLAASDLDVP VARAAEPVLC QLADRLARQA VSAIVTDANG
LVLMRCTGDA AFERRLDRVS LLPGFSYAER FVGTNGIGTA LEEHRPAHVF GQEHYAESLG
EFACAGVPLR DPVTGQTLGL FDLTCPRRDA GPLLAVMAGM VANQIQDVLL LAVPGHDREL
ISLREADAAE LRRLLMAERQ QRELAETMHR VVVETTRAVT PPEILGRVMT AAAAQLPCEA
AWALAREPCG TLRVVAVHGQ VDTRAVGAMI VPLPDSPLLL AFHGGGMIGP HRRLPEVLPG
QRYPVGSWLA VPALCRPAPT VVVLIASRAA GGYNPRQARL AYAVLGQAAA ACENAYLFEE
TQRLADSDPL TGLANRRHFF EQADALVRGH LHAARSLAAF MIDIDHFKQV NDGHGHAVGD
AVLAEVARRV QGTLGPQDIV GRIGGEEFAA VLGCPAATAG VLAERLRQAI GASPVATADG
PLPVTVSVGV AMLNPDDSGL GDLLIRADVA LYQAKRSGRD RVATAQP
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