Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2519 |
Symbol | |
ID | 3904663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2975539 |
End bp | 2976591 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637879849 |
Product | oxidoreductase FAD-binding region |
Protein accession | YP_481615 |
Protein GI | 86741215 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [COG0633] Ferredoxin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGACA CCCACCGGGT CCGGTTCGAG CCGGTCGACG TGGAGATCGA GGTTACCGAG GACGAGACCG TGCTCGACGC GGCGTTCCGC CAGGGCGTCA ACCTGATGCA CGGATGCAAG GAGGGACAGT GCTCGGCGTG CAAGTCCTTC CTGCTTGACG GTGATGTACA GATGGGCCGC TATTCGACCT TCGCGTTGGC CGATTACGAA AGTGATGAGG GCTACATCCT GCTGTGTCGG GCGCATGCCT TCAGCGATCT GTCGGTCGAA CTGGTCAACT ATGACGAGGA CATGATCCGC TCCGGCCTTC CGGTGCGGAC CATAGAAAGC ACTGTCGTGG AGACGGAAGA TCTCACCCAC GACATCACCC GGTTGCGTCT GGACATCACC GGTTCACCGG ACTTCATGTT CCACCCGGGT CAGTACGTCG ATATCACCAT TCCTGGTTCG AGTGAACACC GTTCGTTCTC CATGGCGAAC ATCTCGGCGG CGGAAGGCTA TCTCGAGTTC ATTATCAAGA AGTATCCGGG CGGGCGTTTC TCCGGACTTC TGGAGGACGG TCTGCGCCCC GATGACCCAC TGACCGTCAC CGGGCCGTAC GGTGCTTTCA CGCTCCGGGT GAGCTCGGAC CGTCGGATCG TCTTCATCGG TGGTGGCGCG GGGATGGCCC CGATCCTCTC CCTGCTACGC CAGCTGGCGA CGAAGAACAG CGAGCGGGAG GTCGTCTTCT ACTACGGGGC TCGTGCCCCC CGCGACCTGT TCTATGTCGA CGAGATCCTC CAGACCGGTG CGTCGATTCC CGGCTTCACG TTCGTCCCCT GCCTGTCCGA CAGCATGCCG GAGAACTCGG ACGATATCGG CCATCCCGTG GAAAACGGGC TGGTAACCGA TATAGTGGAC CGGCGCGAGA CCGACATCGC ATCCTGCGAT GTTTACTTGT GTGGTCCGCC TCCCATGATT GACGCGGCAT TGCCGCGGCT TGAGTCGAGT GGGGTCCCGA AAGAACAGAT CTTCTACGAC AAGTTCACTA TCACGGCCGC CGCCGAAAGC TGA
|
Protein sequence | MSDTHRVRFE PVDVEIEVTE DETVLDAAFR QGVNLMHGCK EGQCSACKSF LLDGDVQMGR YSTFALADYE SDEGYILLCR AHAFSDLSVE LVNYDEDMIR SGLPVRTIES TVVETEDLTH DITRLRLDIT GSPDFMFHPG QYVDITIPGS SEHRSFSMAN ISAAEGYLEF IIKKYPGGRF SGLLEDGLRP DDPLTVTGPY GAFTLRVSSD RRIVFIGGGA GMAPILSLLR QLATKNSERE VVFYYGARAP RDLFYVDEIL QTGASIPGFT FVPCLSDSMP ENSDDIGHPV ENGLVTDIVD RRETDIASCD VYLCGPPPMI DAALPRLESS GVPKEQIFYD KFTITAAAES
|
| |