Gene Francci3_2502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2502 
Symbol 
ID3904880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2953901 
End bp2955085 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content69% 
IMG OID637879832 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_481598 
Protein GI86741198 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.845953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGGGAC TGGATGTGGA CCACGACGTG GAGATCGTGG GCTGGGGTCA TACCCCGTTT 
GGCCGTCTGC CCGAGGAGAC TCTGGAGTCG CTGATCGTTG CCGCCGCGCG GGAGGCGATC
GCGTCGGCGG GTCTGCGCCC GCGGGAGATC GACGAGATTG TTCTCGGTAC CTATAACGCG
GGGTTGCAGC CGTTGGCGTT TCCTTCCTCG CTGGTGCTGG AGGCCGATGA CGATCTGCTG
TTCACCCCGG CGACCCGGGT GGAGAACGCG TGTGCGAGCG GGTCGGCGGC GTTGCTGTGC
GGGGTGCGGG CGATTCGGTC CGGGCAGGCG CGCCGGGTGC TGGTGGTCGG GGCGGAGAAG
ATGACCCACG CGTCGGCCGA GGTTGTCGGT GGGGCTTTGC TGGGTGCCGA CTATGAGCAT
GCCGGCGAGT GCGCGCCTGC CGGGTTCGCG CGGTTGTTCG CCGATGTCGC CGAGGCCTAC
TTCACCAAGT ATGGTGATCA CAGTGACGCG TTGGCGCGGA TCGCGGCGAA GAATCATCGT
AACGGGGTGG TGAATCCGTA CGCCCATCTG CGTTCCGATC TCGGCTTCGA GTTCTGTAGC
ACGGTCGGTC CGCGTAATCC GGTGGTCGCG GGTCCGCTGC GGCGTACGGA CTGCTGTCCG
GTCTCGGATG GTGCCGCCGC GGTGGTGCTG GCCGCGCCGG GTGGTGCGCC GCGTGCCCCG
GCGGTGCGGA TCCGTGCTCT GGCGCAGGCC AACGATTTCC TGCCGGCCGC GCGGCGTCAT
CCGCTGGCGT TCGCCGCCGC GCATGGGGCC TGGCAGGCGG CGTTGGGGCA GGCCCGGGTG
CGGCTGTCCG ACCTGCACCT GCTGGAGCTG CACGACTGTT TCACCATCGC GGAGTTGCTG
GAGTACGAGG TCGTCGGGTT GTGCCCGCCG GGCGGCGGGG GGCAGGTCAT CCTCGGTGGG
GTCGTGGACC GGGACGGCAC GCTGCCGGTC AACCCCTCCG GGGGGTTGAA GGCCAAGGGT
CATCCGGTTG GTGCCACCGG GGTGTCCCAG CATGTGATGG CGGTCCTGCA GCTCACCGGC
ACCGCCGGGG CGATGCAGAT CCCCGGGGCC ACCGTCGCCG GGGTGTTCAA CATGGGTGGC
CTGGCGGTCG CCAACTATGC GAGTGTCCTG GAGCGTGTGC GATGA
 
Protein sequence
MKGLDVDHDV EIVGWGHTPF GRLPEETLES LIVAAAREAI ASAGLRPREI DEIVLGTYNA 
GLQPLAFPSS LVLEADDDLL FTPATRVENA CASGSAALLC GVRAIRSGQA RRVLVVGAEK
MTHASAEVVG GALLGADYEH AGECAPAGFA RLFADVAEAY FTKYGDHSDA LARIAAKNHR
NGVVNPYAHL RSDLGFEFCS TVGPRNPVVA GPLRRTDCCP VSDGAAAVVL AAPGGAPRAP
AVRIRALAQA NDFLPAARRH PLAFAAAHGA WQAALGQARV RLSDLHLLEL HDCFTIAELL
EYEVVGLCPP GGGGQVILGG VVDRDGTLPV NPSGGLKAKG HPVGATGVSQ HVMAVLQLTG
TAGAMQIPGA TVAGVFNMGG LAVANYASVL ERVR