Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2497 |
Symbol | |
ID | 3904875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2947845 |
End bp | 2949029 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637879827 |
Product | putative copper resistance protein D |
Protein accession | YP_481593 |
Protein GI | 86741193 |
COG category | [S] Function unknown |
COG ID | [COG3336] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.128305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGGG ACACCTCATC TCTGATCGAT CTCGGCGAGC GCGGAAGGCG TGGGCGCCGT GCCCGGGTCG CGCTGGCCGC TGTCACTGTC ATGGCGGGGG CGGCGGCCGC GGCCACCTGG TGGACCCGCC GCCAGCCGAC GACACCCCTG TTGCCGGTTT CGTGGTGCCG CTGGGGCCAG GGCGACGGGC CGCCCCCGCT GACCCCGGCG CGTCTGGTGG ACACCTGGCA GCTTGACGCG GCCGCGCTCG CCTTCCTCGT GCCGGTCACT GTCCTGTACC TGTGGGGCGT CGCCCGGGTC CGCGCCCGCC ATCCCGCGCG GTCCTGGCCC TGGCCCCGCA CCTGCGCCCA CCTCGCCAGT GTCGCGGTGG TGGTCCTCGC GACGAGCAGC GCCGTCGGCG TCTACGATGA AGCGCTGTTC AGCATGCACA TGGTCCAGCA TCTGATGCTG ATCATGGTGG CGCCACCGCT GTTCGTCGCG GGCCGGCCCC TCATCCTCCT GCTGCACGCT GTCGGCAACC CCCTGCACAC CAGGGTCCGT AAGATGATCC GCTCATGGCC GGTCAGCGTC CTGGTCTCCC CGCCCGCCGC CCTCGCCGGC TACGCCATCA CGATCATCGG AACCCACCTC ACCGGCTTCA TGAACGAGGC GATGGCCCGG CCCTGGCTCG GCCAGCTCGA ACACGTTCTC TACCTCGCTG CCGGCTACCA GTTCTTCGTG CTGCTCGTCG GCGACGAACC GATCCGCTGG CGGTTGTCCA TGCCCGGCCG GCTCGCGCTC GTCATCCTGT CCATGGGCGT CGACACCCTC GTCGGCGTCG TCCTGCTACA GTCCCGCACC CCGATTGCCA TGGCACCGCA CACCTGGGGC AGCAGCCCCC TGCTGGACAC TCAGACCGGC GGCGCTATCA TGTGGGTCGT CGGTGACGGG ATCATGGTTG TGCTCATCGT GCTGCTGTTT CGGGTATGGA CGCGTAAACC CGAGCCGGTG CGCCGGGCCC GTTCGAGCTG GCTGGAACGG GCCCGTACCG CGACCTTTGC CACCCACACC GGCCACGAAC CCGCCCCCAC CACCATGGTG GTCGCCAGAC CGGCCGCCCG GGCGCGATCC GTCGACCTCG ACGATGATGA GGCGAGCTGG CGGGCGTACA ATGACTGGCT CGCTCGCCTG GACACGACCC GTTGA
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Protein sequence | MTRDTSSLID LGERGRRGRR ARVALAAVTV MAGAAAAATW WTRRQPTTPL LPVSWCRWGQ GDGPPPLTPA RLVDTWQLDA AALAFLVPVT VLYLWGVARV RARHPARSWP WPRTCAHLAS VAVVVLATSS AVGVYDEALF SMHMVQHLML IMVAPPLFVA GRPLILLLHA VGNPLHTRVR KMIRSWPVSV LVSPPAALAG YAITIIGTHL TGFMNEAMAR PWLGQLEHVL YLAAGYQFFV LLVGDEPIRW RLSMPGRLAL VILSMGVDTL VGVVLLQSRT PIAMAPHTWG SSPLLDTQTG GAIMWVVGDG IMVVLIVLLF RVWTRKPEPV RRARSSWLER ARTATFATHT GHEPAPTTMV VARPAARARS VDLDDDEASW RAYNDWLARL DTTR
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