Gene Francci3_2497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2497 
Symbol 
ID3904875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2947845 
End bp2949029 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content70% 
IMG OID637879827 
Productputative copper resistance protein D 
Protein accessionYP_481593 
Protein GI86741193 
COG category[S] Function unknown 
COG ID[COG3336] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.128305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGG ACACCTCATC TCTGATCGAT CTCGGCGAGC GCGGAAGGCG TGGGCGCCGT 
GCCCGGGTCG CGCTGGCCGC TGTCACTGTC ATGGCGGGGG CGGCGGCCGC GGCCACCTGG
TGGACCCGCC GCCAGCCGAC GACACCCCTG TTGCCGGTTT CGTGGTGCCG CTGGGGCCAG
GGCGACGGGC CGCCCCCGCT GACCCCGGCG CGTCTGGTGG ACACCTGGCA GCTTGACGCG
GCCGCGCTCG CCTTCCTCGT GCCGGTCACT GTCCTGTACC TGTGGGGCGT CGCCCGGGTC
CGCGCCCGCC ATCCCGCGCG GTCCTGGCCC TGGCCCCGCA CCTGCGCCCA CCTCGCCAGT
GTCGCGGTGG TGGTCCTCGC GACGAGCAGC GCCGTCGGCG TCTACGATGA AGCGCTGTTC
AGCATGCACA TGGTCCAGCA TCTGATGCTG ATCATGGTGG CGCCACCGCT GTTCGTCGCG
GGCCGGCCCC TCATCCTCCT GCTGCACGCT GTCGGCAACC CCCTGCACAC CAGGGTCCGT
AAGATGATCC GCTCATGGCC GGTCAGCGTC CTGGTCTCCC CGCCCGCCGC CCTCGCCGGC
TACGCCATCA CGATCATCGG AACCCACCTC ACCGGCTTCA TGAACGAGGC GATGGCCCGG
CCCTGGCTCG GCCAGCTCGA ACACGTTCTC TACCTCGCTG CCGGCTACCA GTTCTTCGTG
CTGCTCGTCG GCGACGAACC GATCCGCTGG CGGTTGTCCA TGCCCGGCCG GCTCGCGCTC
GTCATCCTGT CCATGGGCGT CGACACCCTC GTCGGCGTCG TCCTGCTACA GTCCCGCACC
CCGATTGCCA TGGCACCGCA CACCTGGGGC AGCAGCCCCC TGCTGGACAC TCAGACCGGC
GGCGCTATCA TGTGGGTCGT CGGTGACGGG ATCATGGTTG TGCTCATCGT GCTGCTGTTT
CGGGTATGGA CGCGTAAACC CGAGCCGGTG CGCCGGGCCC GTTCGAGCTG GCTGGAACGG
GCCCGTACCG CGACCTTTGC CACCCACACC GGCCACGAAC CCGCCCCCAC CACCATGGTG
GTCGCCAGAC CGGCCGCCCG GGCGCGATCC GTCGACCTCG ACGATGATGA GGCGAGCTGG
CGGGCGTACA ATGACTGGCT CGCTCGCCTG GACACGACCC GTTGA
 
Protein sequence
MTRDTSSLID LGERGRRGRR ARVALAAVTV MAGAAAAATW WTRRQPTTPL LPVSWCRWGQ 
GDGPPPLTPA RLVDTWQLDA AALAFLVPVT VLYLWGVARV RARHPARSWP WPRTCAHLAS
VAVVVLATSS AVGVYDEALF SMHMVQHLML IMVAPPLFVA GRPLILLLHA VGNPLHTRVR
KMIRSWPVSV LVSPPAALAG YAITIIGTHL TGFMNEAMAR PWLGQLEHVL YLAAGYQFFV
LLVGDEPIRW RLSMPGRLAL VILSMGVDTL VGVVLLQSRT PIAMAPHTWG SSPLLDTQTG
GAIMWVVGDG IMVVLIVLLF RVWTRKPEPV RRARSSWLER ARTATFATHT GHEPAPTTMV
VARPAARARS VDLDDDEASW RAYNDWLARL DTTR