| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2493 |
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| Symbol | |
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| ID | 3904871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2939930 |
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| End bp | 2941747 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637879823 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_481589 |
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| Protein GI | 86741189 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.526922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.741402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGGAG GAACTCGTGC CCGACGTGGC CGTGTCTGGT CGGATGGCCC GATGACGGTC
GAGGTCCGTC CTTTTCCGCC GAGTGTCGGG GAGCAGCGAG GGGAGCCGCC GACGGCCCTG
GACATCCTCG GTACGACCGA TCACAAGTCG ATCGGTCTGA TGTATCTGGT GACCTCGTTC
GGGTTCTTCC TATTCGCCGG GATCCTCGCG ATGCTAATGC GGGGGGAACT GGCCCGGCCC
GGTCTACAGA TCGTCTCGAA CGAGCGGTAC AACCAGTTTT TTACGATCCA CGGCACGGTG
ATGATGCTGT TGTTCGCGAC CCCGCTGTTC TCCGCGTTCG CGAACTATCT TGTCCCGTTG
CAGATCGGGG CGCCTGACAT CGCCTTCCCC CGGTTGAACG CCTTGGGCTA CTGGCTGTAT
CTGGTCGGCG GTCTGATCGT CGTCTCCGGG TTCCTGACCC GGGGCGGGGC GGCGGACTTC
GGCTGGTTCG CGTACTCCCC GTTGACCTCG GCGCAGTACT CGCCGCACCT CGGCGGTGAT
CTGTGGGCGG TGGGCCTGGT GATGTCCGGG CTGAGCACCG TGCTGGCGAG CGTCAACTTC
ATCACCACGA TCATCACGCT GCGCGCGCCG GGCATGCTCC TGTTCCGAAT GCCGATCTTC
ACCTGGAACG TGCTGATTAC GTCGGTGCTG GCGCTGCTCG CGTTCCCGGT ACTCACCGCG
GCCCTGCTGG CGCTGGAGGC CGATCGCCGG TTCGGCGCCC ACGTGTACGA CGCGAGCAAC
GGAGGAGCGA TCCTCTGGCA GCACCTTTTC TGGTTCTTCG GTCATCCCGA GGTCTACATC
GTCGCGCTGC CCTTCTTCGG CATCGTCACG GAGATCCTGC CGGTGTTCAG CCGTAAACCG
ATTTTCGGGT ACCGGGGGTT GGTCTTCGCG ACCGTGGGAA TCGGCGCGCT GTCGATGGCG
GTGTGGGCGC ACCACATGTT CGCGACCGGT GCCGTGCTGC TGCCGTTCTT CTCTCTGCTG
TCCTTTCTGA TCGCCGTCCC GACCGGGGTG AAGTTCTTCA ACTGGATCGG CACCATGTGG
CGCGGAACGA TCATCCTGAA CACGCCAATG CTGTTCTCGA TCGGATTCCT TATCACCTTC
CTGTTCGGTG GGCTGACCGG GGTCACCCTG GCCAGCCCAC CCATCGACTT TCACGTCACC
GACAGCTATT ACGTCGTGGG TCATCTGCAC TATGTCCTGT TCGGGACAAT CGTCTTCTCC
GCGTTCGCCG GTGTGTACTT CTGGTTCCCC AAGGTGACGG GAAGGTTCCT GAACGAGAAG
TTGGGGAAGC TGCACTTCTG GAGTCTTCTC GTCGGTTTCC ACGTGACGTT TCTGCCGATG
CACTGGCTGG GTGTCAGGGG AATGCCGCGG CGGGTCGCCG ACTACCTGCC CACCGACGGT
TTCACCACGC TGAACACGAT CGAGAGTGCC GGCTCCTTCC TGCTCGGCCT GTCCACCCTA
CCGTTTCTGT ACAATGTTTG GCGGTCGCTG CGGCATGGTG ACCCGGCGAC CAGTGGTGAC
GCCTGGGGCT ACGGGAACTC GTTGGAATGG GCGACGTCCT GCCCACCACC GAAGCACAAC
TTTCACCAGA TACCCCGTAT CCGATCCGAG CGGCCGGCCT TCGACCTGAA CCACCCCCGG
CAGGGGCCGG AGGGGCGGGA AGGTCGCCAG CGGCAGCCGC GCCGGGTCGA CCAGAGGCAC
CGGCGCGAGC TGGCCTCCGT CGAGGGGGAG ACGGCCTCGC GGCGTGATAC CGCGGTGGAC
CCGGACGCGG CCGGGTGA
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| Protein sequence | MRGGTRARRG RVWSDGPMTV EVRPFPPSVG EQRGEPPTAL DILGTTDHKS IGLMYLVTSF
GFFLFAGILA MLMRGELARP GLQIVSNERY NQFFTIHGTV MMLLFATPLF SAFANYLVPL
QIGAPDIAFP RLNALGYWLY LVGGLIVVSG FLTRGGAADF GWFAYSPLTS AQYSPHLGGD
LWAVGLVMSG LSTVLASVNF ITTIITLRAP GMLLFRMPIF TWNVLITSVL ALLAFPVLTA
ALLALEADRR FGAHVYDASN GGAILWQHLF WFFGHPEVYI VALPFFGIVT EILPVFSRKP
IFGYRGLVFA TVGIGALSMA VWAHHMFATG AVLLPFFSLL SFLIAVPTGV KFFNWIGTMW
RGTIILNTPM LFSIGFLITF LFGGLTGVTL ASPPIDFHVT DSYYVVGHLH YVLFGTIVFS
AFAGVYFWFP KVTGRFLNEK LGKLHFWSLL VGFHVTFLPM HWLGVRGMPR RVADYLPTDG
FTTLNTIESA GSFLLGLSTL PFLYNVWRSL RHGDPATSGD AWGYGNSLEW ATSCPPPKHN
FHQIPRIRSE RPAFDLNHPR QGPEGREGRQ RQPRRVDQRH RRELASVEGE TASRRDTAVD
PDAAG
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