| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2490 |
|---|
| Symbol | |
|---|
| ID | 3904868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2938280 |
|---|
| End bp | 2939227 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637879820 |
|---|
| Product | Rieske (2Fe-2S) protein |
|---|
| Protein accession | YP_481586 |
|---|
| Protein GI | 86741186 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0723] Rieske Fe-S protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.267078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.625533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTCCGG CGGGCTCCGC CGACGCGGAG CGACCGCAGC GACCGCAGCG ACCGGCTGGA
CCAGACGGGG CAGCCCGGCC CGGCGGGCCC GGGGGCGTGG CGGGGATAGC GGCCTGCCTG
TCGCTCTCGC TCGTCGGCGC GGTGGCGTTC GCGGTGGTGA ACTTCACCGG CCGGACGGGC
ACCGTCGGCT ACAACGCGCT GCTCGGTCTC TCCCTGGGGT TGGCCATCAT CGCCGCCGGC
ATCGGCGCGG TGCTGTGGGA CAAGCGTCTC ATCCCCCAGG AGGAGGCGGT CGAGGAACGT
CACCCCATGG TCTCGCCGGG CGCCGAGGAG GCGGCCACCC AGCAGACCGT GGACCGGGTC
GTGGCCGAGA CAGGGCTGCG CCAGTTGCCG GTGCTGCGCC GGCTCGTGCT CGCCATGCTC
GGCGGTTTCG GGGTGATAGC CGTGGTGCCG CTGCTCAACC TGGTCAGGCG GGCCCCGCAT
CGGGACCTGT TCACCACCCG CTGGTCACCC GGGGCGCGGC TGGTGACGCC GGAGGGCCGG
CCGGTGCGCC TTGGCGACCT GGCGATCGGC GGCATCCTCA CCGTGCTGCC TGAGGGGCAT
CTCGGCCTCG ACGCCCAGGC GGACAGCGCG GCGCTGCTGA TCAGGCTGCC CCCGGGACTG
GCCACCCCGC CCCGGCAGGC CGCGGCCGGG TACGACAACC ACGTCGCGTT CTCGAAGATC
TGCACCCATG CGGGCTGCCC GGTGAGCATG TACATGAGCC AGCCGCATCA GCTCCAGTGC
CCGTGCCACC AGTCGGTCTT CGACATGACC GACCTGGCCA GGCCGATCTT CGGCCCGGCG
ACCCGTGCCC TGCCCCAGCT GCCCGTCACG GTCGACGCCG ATGGGTGTTT CCGAGCCCGG
TCGGATTTCC CCGAACCGGT CGGGCCCGGC TTCTGGAGCC GCTCATGA
|
|---|
| Protein sequence | MTPAGSADAE RPQRPQRPAG PDGAARPGGP GGVAGIAACL SLSLVGAVAF AVVNFTGRTG
TVGYNALLGL SLGLAIIAAG IGAVLWDKRL IPQEEAVEER HPMVSPGAEE AATQQTVDRV
VAETGLRQLP VLRRLVLAML GGFGVIAVVP LLNLVRRAPH RDLFTTRWSP GARLVTPEGR
PVRLGDLAIG GILTVLPEGH LGLDAQADSA ALLIRLPPGL ATPPRQAAAG YDNHVAFSKI
CTHAGCPVSM YMSQPHQLQC PCHQSVFDMT DLARPIFGPA TRALPQLPVT VDADGCFRAR
SDFPEPVGPG FWSRS
|
|---|
| |