| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2488 |
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| Symbol | |
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| ID | 3904866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2934426 |
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| End bp | 2935592 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637879818 |
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| Product | pyruvate dehydrogenase |
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| Protein accession | YP_481584 |
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| Protein GI | 86741184 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.915026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.661007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATCC TCGACGACAG CACCGCGCCC GGCTTCGTCG GGCCGCCGAG CTCCCACGGT
CCGCGTCGTG ACCCGGCTCC GCTCCTGCCC GACCCCGAGC CGGTCCGGGT CCTCGGCACG
GAGGCGGCGG GGAAGGTCGA CACCGATCTG CTGCGCGTCC TGTACCACCG TCTGGTGCTG
GGACGGCGCT TCAACCAGCA GGCCACGACC CTGGCCAGGC AGGGCCGCCT CGCCGTGTAC
CCGGCGTCCA CCGGCCAGGA GGCATGCCAG ATCGCCGCGG CCATGGTGCT GCGGGAGTCG
GACTGGCTGT TCCCCAGCTA CCGCGACACG CTGGCGGTGG TGTCGAGGGG CGTGCGCCCG
GTGGACGCGC TGACGCTGAT GCGCGGGAAC GCGCACAGCG GCTACGATCC GCGGGAGCAC
CGGATCGCGC CGCTGTCGAC TCCGCTGGCC ACCCAGGCCT GCCATGCGGT GGGCCTGGCC
CACGCCGCTC GCCTGCGCGC GGCCTCGGAT CCGTGGGCGG CGGAGGACGT CGTGGCGCTT
GCCCTGATCG GCGACGGCGG CACCAGCGAG GGCGACTTCC ACGAGGCGCT GAACTTCGCC
GGGGTGCTGA ACGCGCCAGT GGTGTTCCTG GTACAGAACA ACGGCTATGC GATTTCGGTG
CCGCTGGCCC AGCAGTCCGC GGCGCCGACG CTGGCACACA AGGCGGTGGG CCATGGGATC
ATCGGTCGTT TGGTGGACGG CAACGACGCG CCCGCGGTGC ACGGTGTGCT GCGCGCGGCG
GTCGAGCACG CGCGGTCGGG TCGCGGCCCG GTGCTGGTCG AGGCGGTCAC CTACCGGCTG
GAGGCGCACA CCAACGCCGA CGACGCGACC CGCTACCGCA CCTCGGAGGA GGTCGCCGCC
TGGCAGGCCC GCGATCCGCT GACGCTGCTG GAGCGGCAGC TACGCAAGGC CGGTCTCCTC
GACGACGCCG GCGTCGCCGC AGTCGCGCGG GCCGCCGAGG AACTCGCCGC CGAGATGCGC
GCCCAGTTCG ATCGTGTGCC TGATCTCGAT CCGGGCTCAC TGTTCACGCA CGTCTATGCC
CAGCCGACCA GCCAGCTTCG TGAGCAGGCC GCCGAGCTGA TGGCCTGGCA GGCCGCGGAC
GCAGCCAAGA GCGACGACGC ACGATGA
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| Protein sequence | MTILDDSTAP GFVGPPSSHG PRRDPAPLLP DPEPVRVLGT EAAGKVDTDL LRVLYHRLVL
GRRFNQQATT LARQGRLAVY PASTGQEACQ IAAAMVLRES DWLFPSYRDT LAVVSRGVRP
VDALTLMRGN AHSGYDPREH RIAPLSTPLA TQACHAVGLA HAARLRAASD PWAAEDVVAL
ALIGDGGTSE GDFHEALNFA GVLNAPVVFL VQNNGYAISV PLAQQSAAPT LAHKAVGHGI
IGRLVDGNDA PAVHGVLRAA VEHARSGRGP VLVEAVTYRL EAHTNADDAT RYRTSEEVAA
WQARDPLTLL ERQLRKAGLL DDAGVAAVAR AAEELAAEMR AQFDRVPDLD PGSLFTHVYA
QPTSQLREQA AELMAWQAAD AAKSDDAR
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