Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2487 |
Symbol | |
ID | 3904865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2933440 |
End bp | 2934429 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637879817 |
Product | transketolase |
Protein accession | YP_481583 |
Protein GI | 86741183 |
COG category | [C] Energy production and conversion |
COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.511484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.976548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG CGACCATGGT GCGGGCCCTC AACGCCGCGC TGCGCGACTC GCTGCGCGAG GACGCGCGCG TCCACATCCT CGGCGAGGAC GTTGGCACTC TCGGCGGCGT CTTCCGAGTC ACCGACGGCT TGGCTGCCGA ATTCGGCGCG CAACGCTGCC TGGACACCCC CCTGGCCGAG GCAGGCATCC TCGGTACCGC CGTGGGCATG GCCATGTACG GCCTGCGGCC CGTCGTGGAG CTGCAGTTCG ACGCCTTCGC CTACCCCGCG TTCGAGCAGC TCGCGTCGCA TGTGGCCAAG ATGCGTAACC GCACGGCCGG GAAGACCACG CTGCCGATCA CCATCCGCAT CCCGTACGGC GGCGGCGTCG GCGGCGTCGA GCACCACAGC GACTCCAGCG AGGCCTACTA CGCGCACACC CCCGGCCTGC ACGTCGTCAC CCCCGCCACC GTCGCCGACG GCTACGGGCT GCTCCGCTCG GCGATTGCCT CGGACGACCC GGTGGTGTTC CTGGAGCCCA AGCGGCTCTA CTGGTCCACG GACGAGCGGT CCACGGACGA CTTCTCTGCG GCCGAGGTGC CGCCGATCGG CCGGGCGGTG GTCCGCCGGA CCGGTACCTC GGCGACCCTC CTGACCTACG GCCCCTCGCT CCCCGTGTGC CTCCAGGCGG CGGCGGCCGC GCGCTCGGAG GGCTGGGACC TGGCGGTGGT CGACCTGCGC TCGCTGGTCC CCTTCGACGA CGAGACGGTC TGCGAGGCGG TCCGCGCCAC CGGGCGCGCC GTTGTGGTCC ACGAGGCCGC GGGTTTCGGC GGGGTCGGTG CGGAGATCGC TGCCCGCGTC AGCGAGCGGT GCTTCCACCA CCTTGCCGCC CCCGTCCTGC GGGTCACCGG CTTCGACATC CCTTACCCGC CCCCCATGCT CGAACATCAC TACCTTCCCA GCGTCGACCG CATCCTCGAC GCCGTCGCCC GACTCCAGTG GGAGCAGTGA
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Protein sequence | MSAATMVRAL NAALRDSLRE DARVHILGED VGTLGGVFRV TDGLAAEFGA QRCLDTPLAE AGILGTAVGM AMYGLRPVVE LQFDAFAYPA FEQLASHVAK MRNRTAGKTT LPITIRIPYG GGVGGVEHHS DSSEAYYAHT PGLHVVTPAT VADGYGLLRS AIASDDPVVF LEPKRLYWST DERSTDDFSA AEVPPIGRAV VRRTGTSATL LTYGPSLPVC LQAAAAARSE GWDLAVVDLR SLVPFDDETV CEAVRATGRA VVVHEAAGFG GVGAEIAARV SERCFHHLAA PVLRVTGFDI PYPPPMLEHH YLPSVDRILD AVARLQWEQ
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