| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2484 |
|---|
| Symbol | |
|---|
| ID | 3904862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2929339 |
|---|
| End bp | 2930742 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637879814 |
|---|
| Product | diacylglycerol O-acyltransferase |
|---|
| Protein accession | YP_481580 |
|---|
| Protein GI | 86741180 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4908] Uncharacterized protein containing a NRPS condensation (elongation) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.26387 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGC TCGACGTGGT CACGAAGGCC GGTCCCGAGC GGACATACGC TCGTCCACTG
ACCTCGGGTG ACCGGGCCTA CCTCGCCTTC AGCCGGCTCA ATCCCGGGGA GTTCCAGGAC
GTCGGTGCGC TGTTGTTCGT CGACGGCCCT CCGCTGGAGC TGGCGGACCT GCGTGCGCAC
GTCGCCGAGC GGCTGCGCGA CCCCCGGGCA CGGATGCTTA CCGACCGTCT CGAGACTGTC
GCGGTCCGGT TCTCCGGTCG CCGCTCGACG GCGAACGAGA CCCTCTGGGT CCGCGGTCCG
GGCCTGAACG TCGACGACCA CGTTGTCGCC ATGGACCTAC CGTCCGCCGA CGGTGTTGGC
GGTGTTGGCG GTGTGGGCGG GGGCGACGGT GGTGCCGGCG ATGCGCGGCT GCGTGCCGCC
GTCGACCGCA TTGCCGCCCA GCCGATCGAC CTCAGCCGGT CGCCGTGGAT GCTCTACCTG
CTGCGCGCCC CGGGGTCGTC CGGCACGGTG CTGGTGTATC GGACCAGCCA CATCCAGCAG
GACGGCTTCG CGCTCTACCA GGCGCTGCAC CTGCTCTTCG GGGGGGAGGA CGAACTCGAC
CTCGGTCTGC CTCCCGCTGT CCGCCGGCCG CGGCCCTCGG ACTATGCGGG TTTCGTCGGC
CGGGGGCTGC GTTGCCTGGC GCCCACCCGC GCCCTCGACG CCTGGGGCGG GCCGCCGGCC
GGGCCGGCGC GACATTCCTG GGTCACCACC GATCTGGGCA CGCTGCGAGC GGTGGCCCGC
CACCACGATG TCACGGTCAA CGACGTCTAT CTCGCCGCGC TCGCCGGGGC GCTGCGGACG
TGGTCCCTTC CCGAATGGCG CCGGGACCGT CAGCCCATCC ACGCGCTGAT GCCCATCAGT
TTCCGGACCG CCGCCGAACG GAACGTGCTG TCGAACTATT CCTCGGGCGT GCGTGTCCCG
CTTCCCTGCG GGGAGCCGGA CCCCGGCCGG CGACTGGCGT GGATCGCCGC GGAGACCCGT
CGCATGAAGA AGGGCGGGCT GGGGGTGGTG GAACGTCACC ACTTCTCCAC CCTGGCGACG
ATCGCCTCGC CCCGCATGCT CGCGGGCGCC GCCGCTTACC CGGCCCAGAT CCGGAAGATG
GCCCTGGTGG CGAGCAACGT CCGGACGATG CGCGGGCCGC TGGCTGTCGC GGGACGCGCG
GTGACCGGGC TGGTCGGCAC GGGCCAACTA CTCGTCGGAC GTCAGCATCT GGCCGTCGCC
ATGCTTGGCA TCGACGAGCG GGTCGGTGTC ACGTTCGTGG CCAGTGCCAG CGTGCCGAAC
CACGCCCGGT TGGGGCAGCT GTGGCTGGCG GAACTCGACG TGCTCAGCCG GCTGGTGCCC
TCACGCCGGC GTGAGCGTGC CTGA
|
|---|
| Protein sequence | MALLDVVTKA GPERTYARPL TSGDRAYLAF SRLNPGEFQD VGALLFVDGP PLELADLRAH
VAERLRDPRA RMLTDRLETV AVRFSGRRST ANETLWVRGP GLNVDDHVVA MDLPSADGVG
GVGGVGGGDG GAGDARLRAA VDRIAAQPID LSRSPWMLYL LRAPGSSGTV LVYRTSHIQQ
DGFALYQALH LLFGGEDELD LGLPPAVRRP RPSDYAGFVG RGLRCLAPTR ALDAWGGPPA
GPARHSWVTT DLGTLRAVAR HHDVTVNDVY LAALAGALRT WSLPEWRRDR QPIHALMPIS
FRTAAERNVL SNYSSGVRVP LPCGEPDPGR RLAWIAAETR RMKKGGLGVV ERHHFSTLAT
IASPRMLAGA AAYPAQIRKM ALVASNVRTM RGPLAVAGRA VTGLVGTGQL LVGRQHLAVA
MLGIDERVGV TFVASASVPN HARLGQLWLA ELDVLSRLVP SRRRERA
|
|---|
| |