Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2471 |
Symbol | |
ID | 3904849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2915728 |
End bp | 2917275 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637879801 |
Product | Na+/solute symporter |
Protein accession | YP_481567 |
Protein GI | 86741167 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.108302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACG GGACGACCGT GGCGGGATTC ACCGTCGCGA TAGCAGGCAC TTCGTTACTA TCGGTAAGGG CGCGCGCGTT CCATCGGCGG GACGAGCTCC CCTCGCCGGA AGGGTGGGCG CTCGCAGGGC GCCCGTTCGG TGGCGTTCTG ACCTGGTTCC TGCTCGGCGG TGCGATCTAC ACCGCATATA CCTTCGCCGC GGTGCCCGGC CTCGTCTACG GCGTGGGCGC TCTCGGCTTC TTCGCGCTGC CCTACACGAT CATCGTCTAT CCGCTGGCCT TCGTGCTCCT CCCACGTCTG GCGGAGACGG CTCGGCGCCA TGATTACGTC ACGGTGGGCG ACTACGTGCG GGAACGCCAC CGGTCGCCGC TGCTCGCGCT CGCCGTGGCG CTGACCGGAA TCGTGGCCAC CACGCCGTAC ATCGCGCTGC AGTTGGTCGG CGTCCGCGCG GTGCTCGTTG CCGGCGGCCT CACCCCGCCT GGGCTGCCCG GCGACCTGGT GCTGGCCTCG GTGTTCGGGG TGCTCGCCGT CGCGACCTAC CGCAGCGGCA TCCGCGCTCC GGCACTCGTC TCGGTCGCCA AAGGAATTCT GATCTTTTTG GCGGTCTTCG CCGTGGTCGG ACTCGTCCTA GCCAGGCTCG GCGGACCCGG CGAGATCTTT GCCGCAGCAC GGCGGAACAT GGCCACGGAC GGCTTGCCGG ATCCGTCGCT CACGCTGGAG CCGTCGACGT TCGCCTCGTT CGCGAGCCTC GTGCTCGGCT CGGCGATGGC CCTGCTGGTG TACCCGCACG TGCTCACCGC CGCATTTGCG GCGAAGGACC CCGACGTCCT GCGCCGCTCG GCGGTCACCC TGCCCGCATG GACGGGCCTG CTCGGACTCT TCGGGCTGCT CGGCGTTGCC GCCTTGGCCA CGGGGGTACG CACACCCCGC GGGCAGGCCG AAGCAGCTGT CCCTCTGCTC GTCCAGCAGC TGGCCCCACC GGTTGTCACC GGCGTCGTAT TCGGCGCGCT CGTTGTCGCG GCGCTCGTCC CCGCGGCGGT GATGTCGGTG GCGGTCGCCA TGCTCTTCGT CCGCAACGTA TACGTCGAGT ATTTTCACCC CACGGCCACC CCTAAGCATC AGGTCCGGGT GGCTCGCGGT GTCTCGCTGG TGACAAAGAT CGGGGCATTC GCCTTCGTGC TCGGTCTGCG CGACCAGGAT GCCATCGATC TGCAGCTGCT GGGCGGGGTC TGGATACTCC AGACCTTCCC GGCGGTCGGG ATCGGCCTGT TCTCCACCTG GCTGCATCGC GGTGCGCTGC TTGCCGGATG GGCGGTAGGA ATGGCGGCGG GAACCTGCCT GGTAACCTCC GGCGAATTCT CCGCGGTGGT GAACCTGCAC CTGTTCGGGG CGTCCGTGCC GCTGTACACG GCGCTCCTCG CGCTCGGGCT GAACCTGGCG GTCGCCACCG CGCTCACCCC GGTCCTTCAC CGCGTCGGCG TGGCCCGGAG CAGCCGGACA TCCCAGGTGG ACCGACTCCC CCGGCCGGAC GCGCCGGGAT GGCGGTGA
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Protein sequence | MADGTTVAGF TVAIAGTSLL SVRARAFHRR DELPSPEGWA LAGRPFGGVL TWFLLGGAIY TAYTFAAVPG LVYGVGALGF FALPYTIIVY PLAFVLLPRL AETARRHDYV TVGDYVRERH RSPLLALAVA LTGIVATTPY IALQLVGVRA VLVAGGLTPP GLPGDLVLAS VFGVLAVATY RSGIRAPALV SVAKGILIFL AVFAVVGLVL ARLGGPGEIF AAARRNMATD GLPDPSLTLE PSTFASFASL VLGSAMALLV YPHVLTAAFA AKDPDVLRRS AVTLPAWTGL LGLFGLLGVA ALATGVRTPR GQAEAAVPLL VQQLAPPVVT GVVFGALVVA ALVPAAVMSV AVAMLFVRNV YVEYFHPTAT PKHQVRVARG VSLVTKIGAF AFVLGLRDQD AIDLQLLGGV WILQTFPAVG IGLFSTWLHR GALLAGWAVG MAAGTCLVTS GEFSAVVNLH LFGASVPLYT ALLALGLNLA VATALTPVLH RVGVARSSRT SQVDRLPRPD APGWR
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