| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2454 |
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| Symbol | |
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| ID | 3905066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2861770 |
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| End bp | 2862837 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879784 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_481550 |
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| Protein GI | 86741150 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.19659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTC ATTCGATCGA CCACATTGAG CTGTTCGTCG AGGACGCCGC GCAGGCTGCG
GCCGAACTGT GCGATTCCTT CGGTTTCACC GTCACCGGCC GAGGCGGGCC GCGCACCGGG
CTCAAGGGCT GCGAGTCGGT GCTGCTGCGG CAGTGCGACA TCACTGTCGT CGTCACCGCC
GCGACCAGCT CCGACCACCG CGCCGCCGAG TTCGTCCGTC GGCACGGCGA CGGAGTGGCG
GTCATCGGCT TCGCCGTCGA CCAGGCGCAG GCCGCGTTCG CCGAGGCGGT GAATCGTGGA
GCGGTGCCGG TCACGCCGCC CGAGACCCTG GGAACGCCGG GCGGCCGCGT GACCTTCGCG
TCGGTGGCCG GGTTCGGCGA CGTGGAGCAC CGCTTCACCT CCCGGGAGGC GGTCGAGGGG
CCCTTCTCGC CCGGCCTCAT CGAGGAGACC GTCCCAGACC GCTCCAACGA AGGCCTGCTC
AGGGCCATCG ACCACGTCGC GGTCTGCCTG CCCGCCGGCG AACTGCACCC GACCGTACGC
GCCTATCGGG ACGTGTTCGG CTTCACCCGG ACCTTCGAGG AGCGCATCGT GGTCGGCTCT
CAGGCCATGG ACTCCCAGGT GGTGCGCAGC CCGTCCGGCA AGGTCACCTT CACCATCATC
GAACCGGACA CCACCCGCGC CCCCGGCCAG ATCGACGAGT TCGTCCGCTC GCACGGCGGG
GCGGGAATCC AGCACATCGC GTTCCGCACC GACGACATCA CGGCGGCGGT CCGGGACAGC
GCGAAGCGCG GGGTGCGGTT CCTCACCACC CCGGCGAGCT ACTACGAGGC GCTGCCGGCG
CGGCTCGGCC CGGTCGGCGT CCCGGTGGAG ACGCTGCGTG AGCTCAATAT CCTGGCCGAT
CGCGACCACG GCGGCGTCAT GCTGCAGATC TTCACCGCGT CCCGGCACCC CAGGCGGACC
TTTTTCCACG AGCTGATCGA CCGCCGCGGC GCCCACACGT TCGGCAGCAA CAACATCAAG
GCCCTGTACG AGGCCGTCGA ACGCCAACGG GCCGCCGAGA GCGCCTGA
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| Protein sequence | MDIHSIDHIE LFVEDAAQAA AELCDSFGFT VTGRGGPRTG LKGCESVLLR QCDITVVVTA
ATSSDHRAAE FVRRHGDGVA VIGFAVDQAQ AAFAEAVNRG AVPVTPPETL GTPGGRVTFA
SVAGFGDVEH RFTSREAVEG PFSPGLIEET VPDRSNEGLL RAIDHVAVCL PAGELHPTVR
AYRDVFGFTR TFEERIVVGS QAMDSQVVRS PSGKVTFTII EPDTTRAPGQ IDEFVRSHGG
AGIQHIAFRT DDITAAVRDS AKRGVRFLTT PASYYEALPA RLGPVGVPVE TLRELNILAD
RDHGGVMLQI FTASRHPRRT FFHELIDRRG AHTFGSNNIK ALYEAVERQR AAESA
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