Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2429 |
Symbol | |
ID | 3905041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2822237 |
End bp | 2823496 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637879759 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_481525 |
Protein GI | 86741125 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0694063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.318501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAGC ACCACATGAC CGAGCACCAG CGGCACCGCA CTGCGCCGGG CGCCGCCCCG GACTCCCCTT CGCCGCACGT CCCGCTGCCG TTGGCCGGGG TGACCGTGGT CAGCCTGGAG CAGGCCGTCG CGGCCCCGTT CGCCACCCGC CAGCTGGCTG ATTTCGGCGC GCGGGTCATC AAGATCGAAC GGCCCGACGG CGGCGACTTC GCCCGCCGCT ACGACGTGTC GGTGCACGGC CAGTCGAGCT ACTTCGTGTG GCTCAACCGC TCCAAGGAAT CCCTCACCCT GGACGTGAAA ACCGCCGAGG GGCGCGCGGT TCTGGAGGAG CTGCTGGCCA GGGCCGACGT GCTGGTGCAG AACCTCGGCC CCGGCGCCGC CGCTCGCCTC GGCCTCGACG CCTCGTCCCT GGCCGACCGG CACCCTCGGG TGATCCCCTG CACGATCTCC GGCTACGGTA CCGACGGGCC CTGGGCCGAC CGGAAAGCCT ACGACCTGCT CGTGCAGTGC GAGACCGGCC TCGTGTCGCT GACCGGTAGC CCGGACCAGA TGGCGAAGGC CGGGATCTCG GTCGCCGACA TCGCCGCCGG CATGTACGCC TACACCGGCA TCCTCACCGC CCTCTACCGG CGCGCCACCA CGGGGTCGGT CTCCGCGGTC GAGGTATCGT TGTTCGAGGC CCTCGCCGAG TGGATGGGTT CACCGGCCTA CTACACCCGG TACGGCGGGC GGCAACCGGC ACGGGTCGGC GCTCAGCACG CCACCATCGC CCCCTACGGC CCGTTCACCA CCGCCGAGGA CCAGACGGTG CTGCTGGCCA TCCAGAACGA ACGCGAATGG CACGCCTTCT GCCGGATCGT GCTCGACGAC CCGACCCTGA CCGAGGACCA CCGCTTCGCG ACCAACTCCG CACGCGTCGC CCACCGCGAC GCCCTCAACG GGGTGATCGC GGACCGATTC GCCGCGCTCG ATACCGGCAC AGTGCTGGCG TTGCTGGCCA AAGCCGGTAT CGCCAACGCC CGACTGAACT CCGTCGCCCA CTTCCTCGAC CATCCCGTCC TGACTGGCCG CGACCGGTGG CGCACCGTTG CCACCCCCGG CGGCGACATC GGTGCCCTCC TGCCTCCGGT CACCCTCACC GACCTGGACC CGGTGATGAA CCCCGTTCCC GCCCTCGGCG AACACACCGA CACCATCCTG CGCAGCCTGG GCCGCACCGA TACCGCCATC GCCGCGCTCC GTGCCGACGG CGTCATCTGA
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Protein sequence | MTEHHMTEHQ RHRTAPGAAP DSPSPHVPLP LAGVTVVSLE QAVAAPFATR QLADFGARVI KIERPDGGDF ARRYDVSVHG QSSYFVWLNR SKESLTLDVK TAEGRAVLEE LLARADVLVQ NLGPGAAARL GLDASSLADR HPRVIPCTIS GYGTDGPWAD RKAYDLLVQC ETGLVSLTGS PDQMAKAGIS VADIAAGMYA YTGILTALYR RATTGSVSAV EVSLFEALAE WMGSPAYYTR YGGRQPARVG AQHATIAPYG PFTTAEDQTV LLAIQNEREW HAFCRIVLDD PTLTEDHRFA TNSARVAHRD ALNGVIADRF AALDTGTVLA LLAKAGIANA RLNSVAHFLD HPVLTGRDRW RTVATPGGDI GALLPPVTLT DLDPVMNPVP ALGEHTDTIL RSLGRTDTAI AALRADGVI
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