Gene Francci3_2426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2426 
Symbol 
ID3906409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2818924 
End bp2819658 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content73% 
IMG OID637879756 
Productserine O-acetyltransferase 
Protein accessionYP_481522 
Protein GI86741122 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0277751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.185612 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCTCGA CGCTGCGCCA TGACCTGCGC ACGGTGAAGG AACGGGATCC GGCCGCCCGC 
TCCACCCTCG AGATCGCCCT GTGCTATCCC GGCGTGCACG CCGTCTGGGG CCACCGGATC
AGCCACTGGC TGTGGACCCG TGACCTGCGG CTGCCCGGGC GCGTGGTTGC CACGCTCACC
CGCATGCTCA CCGGGGTCGA GATCCACCCC GCCGCCACGC TCGGCCCCGG CGTCTTCATC
GACCACGCCA CCGGCGTGGT CATCGGGGAG ACCGCCGAGG TCGGCGCCGA CGTCACGATC
TACCACGGGG TCACCCTCGG CGGCACCAGC CTGGAACCGA CCAAGCGGCA CCCCACCATC
GGCGACCGAG TGATCATCGG TGCCGGCGCC AAGGTTCTCG GCAACATCAC CGTCGGCTCG
GACAGCCGCA TCGGGGCCAA CGCCGTCGTC GTGCGGCCCG TGCCGCCCGG CTCAGTGGTC
GTTGGCGTCC CCGGCCAGGT CATCACCCCC AGCCGTCCCC GGCCGGCCAC CGCCCTGCCC
GGTCAGGACG ACGTGCTCCC CGACCTCGTC GGCGTCAGCC TGAAGTCCCT GCTCACCCGG
GTCGACCAGC TGGAGGCGGT GCTCGACGGG AACACCGGGA ACACCGACGG CCGCGCCGAC
GGGCGGGTCG CAGCCCGTCC CACGATCCGC CCGCCCCAGG CCGGTGTGTG GCACGGCGAG
GACTTCTCCA TCTGA
 
Protein sequence
MLSTLRHDLR TVKERDPAAR STLEIALCYP GVHAVWGHRI SHWLWTRDLR LPGRVVATLT 
RMLTGVEIHP AATLGPGVFI DHATGVVIGE TAEVGADVTI YHGVTLGGTS LEPTKRHPTI
GDRVIIGAGA KVLGNITVGS DSRIGANAVV VRPVPPGSVV VGVPGQVITP SRPRPATALP
GQDDVLPDLV GVSLKSLLTR VDQLEAVLDG NTGNTDGRAD GRVAARPTIR PPQAGVWHGE
DFSI