Gene Francci3_2425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2425 
Symbol 
ID3906408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2817702 
End bp2818736 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content79% 
IMG OID637879755 
Productprotein serine/threonine phosphatases 
Protein accessionYP_481521 
Protein GI86741121 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0167963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.11217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG GACAGCGGCC GGGACCGGCG TCGGGGCCAC GGGACCCCGG CCTGGCGGAC 
CCCGGCACGG CGGACCCCGG CACGGCGGAC CCCGGCACGG CGGGACGCTG CCCCGGCTGC
GCGGCGCCGG TCCTTCCCGA CGACCGGTTC TGCGAACGCT GCGGCGTGGC CCTGACGGCG
GCCGGCCGCG AGCCCGGCGA CCGGATCGAT GTCGACCTGA CGATCGCGGC CGGCGTGTCG
GACCGCGGCC TCGTCCACCG GAGCAACGAG GACGGGTTCG CCCTCGCCGT CGTCGGCCCA
CCCGGGCCAG CCGGCCCGGC CTATCCAGCC GACCTGCCCG GCCCGGCCCG CCCGGCGGTC
GTGGCGGTCG TGTGCGACGG GGTGTCGACG GCTCCCGGCT CGGGACCGGC CGCCGTGGCC
GCTGCCCGGG ACGCCACCGC CTTCCTGGCC GACGCCGTGG GCACGCCGAG GTCTCCCGAG
CCGACGGGCG GCGGCGTCCC CTGGGAGAAC GCCGCGCTGC GGGCGGCGGC CGCGGCCGCC
CAGCGCAGCG CCGTCGCCTC GATCACCAGC CCCGACGACG CGCCGGCCTG CACGTTCGTC
GCGGCGATCG TGACGGCGGA CCGGCTCGCC GTCGGCTGGC TCGGGGACAG CAGAGCCTAC
CTACTCGGCC CGCGGGGCGC GCACCTGCTG ACCGAGGACG ACACGCTGGC GGCCGAGGCG
GTGCGGGCCG GCCTGCTTCC GGCCGAGCTG GCCGAGACGG CGCCCGGCGC CCACACCATC
ACCCACTGGA TCGGGACGGG CAGCGGGTCG GCGGTACCGC GCGTCGTCTC GCTGCCCCTC
ACCGGGCCGG GACGGGTGGT GCTGTGCAGC GACGGGCTGT GGAACTACGC CTCGGCCGCC
ACGGCCCTCG CCGGTCACGT CGGGCGCCTG CCGGCGGACG CGCCCGCCGC CGCGGTCGCC
CACCATCTCG CCTCGGTGGC GCTGGCCGCC GGCGGCGCGG ACAACATCAC CGTGGTCGTC
ATCGACATAT TCTGA
 
Protein sequence
MNAGQRPGPA SGPRDPGLAD PGTADPGTAD PGTAGRCPGC AAPVLPDDRF CERCGVALTA 
AGREPGDRID VDLTIAAGVS DRGLVHRSNE DGFALAVVGP PGPAGPAYPA DLPGPARPAV
VAVVCDGVST APGSGPAAVA AARDATAFLA DAVGTPRSPE PTGGGVPWEN AALRAAAAAA
QRSAVASITS PDDAPACTFV AAIVTADRLA VGWLGDSRAY LLGPRGAHLL TEDDTLAAEA
VRAGLLPAEL AETAPGAHTI THWIGTGSGS AVPRVVSLPL TGPGRVVLCS DGLWNYASAA
TALAGHVGRL PADAPAAAVA HHLASVALAA GGADNITVVV IDIF