Gene Francci3_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2424 
Symbol 
ID3906407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2815348 
End bp2817705 
Gene Length2358 bp 
Protein Length785 aa 
Translation table11 
GC content75% 
IMG OID637879754 
Productserine/threonine protein kinase 
Protein accessionYP_481520 
Protein GI86741120 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0271655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0697839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGTCG GCACCGTTCG CCCCGCCGCC GACGCCACCG GTCGCCCGCT ACCGGGACTG 
ACCGATGATG ATCTCTCGGT GGGAGATGGA CGCGGTCCTG ACCCGGCTGC GTTCGGGGGG
CGCTCCCCCT CGCCCACCCC TCACCTCAAC CCCGATCTCA ACCACGATCT CAACCACGAT
CTCAACCGAG GAGCGTGCGT GAACGCGGTC ATCCCCTGCC CGGAGCCGGA CTGCGGCGGC
GTCGTCGAGG ACGGGTCGCG GACCGCACCG AGCCGGCTGG GCGCGGGTCT GGTCGAGGTG
CCCGAGCCCG ACGTGCCCGA GCCCGACGTG CCGGACCCGG CGTCGATGCT GCTGGCGGAC
CCGCAGATCC CGGAACGGCG GCGGGCCTGT GCCGGGTGCG GCGCGCCGGT GGGACGCGCC
CGGGGCCGCC GGCCCGCGCG TCCCGAGGGC TTCTGCCCGG GATGCGGCCA GCCGTTCTCG
TTCCGTCCCA CGCTGCACGC CGGTGACCGC GTCGGGCCGT ACGAGATCGC GGGGGCCCTC
GCGCACGGCG GCCAGGGCTG GATCTACCTC GCCCGGGACC CGAGCGTCGC GGAGGGCTCC
TGGGTCGTGC TCAAGGGCCT GCTCGACTCC GGCGACCGCG AGGCACAGGC CGCGGCCATC
GCCGAGCGCC GGTTCCTGGC CTCCGTCGAC CATCCGGCGA TCGTGCGGAT CTTCACCTTC
GTCGAGCATG CCGGCACGAG CTACATCGTG ATGGAGTACA TCGGCGGCAC CTCGCTGCGG
GAGGTGCTGT GCCGGCGTCG GGCCGACGCC GGCCGGCCCG ACCCGCTGCC GGTCACCCAG
GCCGTCGCCT ACCTCCTCGC GGCGCTGCCC GCCTTCGCCT ACCTGCACCG AAACGGCCTG
GTGTTCGGCG ACTTCACACC CGACAACGTG ATGCTCGGCC GGGAGACACC GCGCCTGATC
GACCTCGACG CGATCCGTCG CATCGACGAC GGCGCAGTAG CCGGAGCCGG CTGCGGCACC
CTCGGCTACC AGGCACCCGA GGTGCCCACC ACCGGCCCCT CGGTCGCCTC CGACCTGTTC
GCCGTGGGAC GCACTCTCGC GACCCTCATC CTGGACTTCC GCGGTAACAC CTCGACCTAC
CTGCACACGA TGCCACCGGC GGCGGACCAT CCCGTCCTCG CCCGGCACGA GTCGCTGTAC
CGGTTCCTGC TCAAGGCGAC CGCGCCCGAT CCCGACCGCC GCTTCACCGG CGCCGAGGAG
ATGCACGACG AACTGCTGGG GGTGCTGCGG GAGATCGTCG CGGCCGAACG CGGGACACCG
GCCCCGGCGC CGGCGCCGAG CCGGCGGTTC ACCGGCGACC TCCACCCCAC CGGCGAAGGT
GGCCTCACCG GCGAAGGTGG CCTCACCGGC GAAGGTGGCC TCACCGGCGA AGGTGGCCTC
ACCGGCGAAG GTGGCCTCAC CGCGCTGCCG CCGTGGTCGG TGCTGCCCCG GCTACGGGCC
GACCCCGACG ACCCGGCGGC GGACCCGCTC ACCGCCCTGC CGGACCTCGC GCCCGAGCAG
CTCGCCGAGC TGCTCGGTGC GATGGGAACC ACCAGCGTCG GGGCGCGCCT GCACCTGGCC
GACCTGCGGA TGCGCCTGGG CCGGACCGCC GCCGCCCGCG AGATGCTCGC CGAGATCGAG
GCGGAGGACC CCTTCGAGTG GCGGGTGGAC TGGCAGCGCG GGCTGCTGGC ACTCGCCGAC
GGCGACACCG CCGCGGCCCG CGGCGCGTTC GACCGGGTCT ACGACGAGGT CCCGGGCGAG
CTCGCGCCGA AGCTGGCGCT GGCGCGCACC GCGGAGGCCA CCGGCGACCT CCCCCGGGCG
CAGCAGCTGT ATGACCTGGT GTCGCGCACC GACGACGCGT TCACCGGCGC GGCGTTCGGG
CTGGCGCGGG TGCGGATCGC CGCGGGCAAC CGCGACGGTG CGGTGGCCGC CTACCGCCGG
GTACCACCGG CCTCGGCCGC CCACGTCGAC GCCCAGATCC GGCTGGCCCG GGTACTCGGC
ACGGTGACCG TGGCCGGCGT CCCCAACCGG GCCGGCATCA TGGCCGCGTC GGACGTGCTG
GCCGGCCTGG ACCTCGACTC GGGCCGCCGG GCCGCTCTCA CCCGGGATCT GCTGACCACC
GCGCTCGACC TGGTGGCGGC CGGCACGCTC CCGGTGGACC CGGGCGTCAC GGTCGCCGGT
GCCGCACTGC GGGAAGCGGA CCTGCGCTTC GGCCTGGAAC GCGCCTACCG GGAGCTCGCC
CGGCTGGCCG CGACCACCGA CGAGCGGTAC GCCCTCGTCG ACCTCGCCAA CCGTGTCCGC
CCGCGGACCC TGGTATGA
 
Protein sequence
MAVGTVRPAA DATGRPLPGL TDDDLSVGDG RGPDPAAFGG RSPSPTPHLN PDLNHDLNHD 
LNRGACVNAV IPCPEPDCGG VVEDGSRTAP SRLGAGLVEV PEPDVPEPDV PDPASMLLAD
PQIPERRRAC AGCGAPVGRA RGRRPARPEG FCPGCGQPFS FRPTLHAGDR VGPYEIAGAL
AHGGQGWIYL ARDPSVAEGS WVVLKGLLDS GDREAQAAAI AERRFLASVD HPAIVRIFTF
VEHAGTSYIV MEYIGGTSLR EVLCRRRADA GRPDPLPVTQ AVAYLLAALP AFAYLHRNGL
VFGDFTPDNV MLGRETPRLI DLDAIRRIDD GAVAGAGCGT LGYQAPEVPT TGPSVASDLF
AVGRTLATLI LDFRGNTSTY LHTMPPAADH PVLARHESLY RFLLKATAPD PDRRFTGAEE
MHDELLGVLR EIVAAERGTP APAPAPSRRF TGDLHPTGEG GLTGEGGLTG EGGLTGEGGL
TGEGGLTALP PWSVLPRLRA DPDDPAADPL TALPDLAPEQ LAELLGAMGT TSVGARLHLA
DLRMRLGRTA AAREMLAEIE AEDPFEWRVD WQRGLLALAD GDTAAARGAF DRVYDEVPGE
LAPKLALART AEATGDLPRA QQLYDLVSRT DDAFTGAAFG LARVRIAAGN RDGAVAAYRR
VPPASAAHVD AQIRLARVLG TVTVAGVPNR AGIMAASDVL AGLDLDSGRR AALTRDLLTT
ALDLVAAGTL PVDPGVTVAG AALREADLRF GLERAYRELA RLAATTDERY ALVDLANRVR
PRTLV