| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2407 |
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| Symbol | |
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| ID | 3906390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2790337 |
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| End bp | 2791557 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637879737 |
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| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
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| Protein accession | YP_481503 |
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| Protein GI | 86741103 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.463668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0231198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGGTGC AGGACGCAAT CAATGTCGAG GACTTCCGGG AACTGGCGCG CCGCAGGCTT
CCCCGGGCGG TTTTCGACGC CATGGAGGGC GGCGCCGGCG ACGAGGTGTC GCTCAGGCGT
AACCGCACGG CGTTCGACCG CATCGAGTTC CGCCCGCGGC CGCTCGCCGA CGTCGCCACA
CGAGACCTCT CGACTACCGT GTTCGGCGAG CGGCTGTCGA TGCCGATCAT GCTGGCGCCC
ACGGGCGCGG GCCGCCTCGC GCGCTCGTCC GCGGAGATCG CTGTGGCGAG GGCCGCGGCG
CGGGCGGACA TCGTGTACAT GCAGAGCACC GTGGCAGCCT TCCCGCTCGA GGATGTCGCC
GCGCGCTCGA CCGGCACGCT GTGGTATCAG CTCTACCTGC CCCCCAACCG CGCCGAGGTC
GGGAACCTCG TCCGGCGGAT CGCGGCGGCG GGTTACCGGG CCCTGGCCAT CACCATCGAC
ACGCCGGTCC TGGGCAACCG TGAACGCGAC ACCCGCAACA AGCTCATGAG TCGGCCGCCG
CATCCCAAGA TGCTGCTGCA GGGGGCCAGC AAGCCGGCGT GGGCGACCGA TTTCATCCGC
GGCAAATTCG ACTTCATGCG CAAATTCGAC TTCATGCGCA AATTCGACTT CATGCGCGGC
CAATTCGGCG CCGGCTGTCC CGGCGGCCCG TCCCGGCTAA GCCTCAACCA GACCCGAGCG
ACAATCAAAT CGTCGTCGGA CTGCGTCACC TGGGAGGACG TCGAGCGGAT CCGGTCGTTG
TGGGAAGGCC CGTTGCTCCT CAAGGGCCTG ATGCGCGGGG ACGAGTGCGA CCGGCTCGTC
GAGCTGGGCG TCGACGGTGT CGTGGTCTCG AACCATGGCG GGCGGCAGTT GGACGGCGTC
CCCGCGACCA TCGATATTCT GCCGGAGGTG GTTGACGCGG CGGCGCGCAG ACTCACGGTG
TTCCTCGACG GAGGTGTCCG GCGAGGCAAC GACGTGGTCA AGGCGCTGGC CCTCGGCGCC
GCAGGGGTCT TCGTGGGTCG GCCCTACCTG TACGGCCTCG CCGCGGGCGG CGAGGCCGGT
GTCCTACGGA TGATTGAACT GCTGCGCGTG GAATTCGACC ACGCGATGGC ACTGCTCGGC
GCCGCGACCG TGGCGGACCT CGACCGCAGC CTCGTCTCGG GCGCACGTAT CCCCAGCACC
CTCTCACCGT CGACGCGATA G
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| Protein sequence | MRVQDAINVE DFRELARRRL PRAVFDAMEG GAGDEVSLRR NRTAFDRIEF RPRPLADVAT
RDLSTTVFGE RLSMPIMLAP TGAGRLARSS AEIAVARAAA RADIVYMQST VAAFPLEDVA
ARSTGTLWYQ LYLPPNRAEV GNLVRRIAAA GYRALAITID TPVLGNRERD TRNKLMSRPP
HPKMLLQGAS KPAWATDFIR GKFDFMRKFD FMRKFDFMRG QFGAGCPGGP SRLSLNQTRA
TIKSSSDCVT WEDVERIRSL WEGPLLLKGL MRGDECDRLV ELGVDGVVVS NHGGRQLDGV
PATIDILPEV VDAAARRLTV FLDGGVRRGN DVVKALALGA AGVFVGRPYL YGLAAGGEAG
VLRMIELLRV EFDHAMALLG AATVADLDRS LVSGARIPST LSPSTR
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