| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2400 |
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| Symbol | |
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| ID | 3906383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2778591 |
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| End bp | 2780246 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637879730 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_481496 |
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| Protein GI | 86741096 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0818729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0245433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGATCC GGGTGAGGCT GACCCTGCTG TTCGCGCTGG GGACCGCGAT CGTGCTCGCC
GTCGCTGGCG TCCTGTTCTA CCTGCTGCTC CGGGTGAACC TGCGGGACTC CGTTGACGCC
GACCTGCGGA CCCGGTCGGA TCTGCTGACG GTCAGGCTCG CCGATCGGTT TGATGCCGCC
CGGCCCGGGG GCGCCGGGGG CGTTGGTCGA GCCGATGCGG CCGATCTGCT CGTGGGCGGC
GGATCGATCG CCCAGGTGCT CCGGGCGGAC GGGACGCCGA TCGTCTCGTC GCCGGACGCC
GGGTCGCGGC CGCTGCTGAC CGCGGACCAG CTCGCCCGGG CCCGGGCGCA GCCGACCCTG
GTCACCCGGG AAGTGCGGGC CGGCACCGGG ATCAGGCCGA CCGGAGATGT CCGCGTCCTG
GCCGTGGCGG TGCACACGGG CCGGGCCACC ATGATCGCGG TCGTCGGCAC GCCGACGCAC
CTCACCGACA GGGCCGAGGA CCGGGTCCGC AACGTGATGG TGGTGGCGAC GGCTCCGACG
ATCGCGCTGG CCGGCCTCGC CGCCTGGCTG CTCTCGGGGG CGGCGCTGCG GCCGGTGGAG
CGGATGCGCC GGCAGGCGGC CGCCATGGCG GCCGCGGAGG TGGTCGCCGC CGGTCCGGTC
GCCGCCGGTG GCGGCGACCC GGTCACCGCC GGCAGGAACG GCGAGCTGGC GGTGCCCGCG
ACCCATGACG AGATCGCCGC TCTGGCCAGA ACGATGAACG ACCTGCTCCG CCGGCTGAAC
GCGGCCCGTG CCCGGGACCG TGCCTTCGTC GCCGACGCCG GCCACGAGCT GCGGACGCCC
CTGACCGTGC TCAAGGCCGA GCTGGAGCTC GCCGCCCGTC CCGGTCGCAC GCGCGAGGAG
CTGATCGAGG CGATCGTCAA CGTCTCGGAC GAGACCGACC GGCTCATCCG GCTGGCCGAG
TCGTTGCTCA CGCTCGCCCG GATGGACGGT GGTCTCGTCG GACAGGGGCG GGTCGCGCTC
GACGAGGTAC TCACCCGCTC CGCCCGGGCA GCGACGGGCT TTCTCCAGGC GCGCGGGCTA
CGACTCCGGC TTGGCGTCGC CGACGCGCAG CGGCCGCTGG AGGTCCTCGG CGACGGGGAC
ATGCTCCGGC GGGCGGTCGA CAACCTGCTT GCCAACGCCG CGCGTCACGC ACCCGCGGGC
AGCGTCGTCG AGCTGCGGGG ATGCCGCACA CCGCGGCGGG TCGTCGGGCC GTGGGTGGGT
GTGGACGGGC CGGGCGAGGT CGTCATCGTG CAGATCCGCG ACCGCGGCCC CGGGTTCCCT
CCCGAGTTCC TGCCGTACGT GTTCGAACGG TTCCGTCGCG CGGACACCGC CCGCACCCGG
GACCACGGCG GTGCCGGGCT GGGTCTCGCG ATCGTCGCCG CGATCATCAG TGCACACGGC
GGCACCGTCG AGGCGGCCAA CTGTCCGGAC GGCGGCGCGG TCGTCACCGT CACCCTGCCT
GCGACCGCCT GGCCTCCCGG TCCGCCGTCG GCGAGCCTGG CCTCCCGGTC CGCCGCCGGC
GAGGGTGCAC CGGGTCGTCC GGGTGAGCCC CGCCGTCCCG ACGGGCCCGC GCGTCAGCCG
TCGGCGAGGG ATCTCCGGTC CCGGCGCAGG GGATGA
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| Protein sequence | MPIRVRLTLL FALGTAIVLA VAGVLFYLLL RVNLRDSVDA DLRTRSDLLT VRLADRFDAA
RPGGAGGVGR ADAADLLVGG GSIAQVLRAD GTPIVSSPDA GSRPLLTADQ LARARAQPTL
VTREVRAGTG IRPTGDVRVL AVAVHTGRAT MIAVVGTPTH LTDRAEDRVR NVMVVATAPT
IALAGLAAWL LSGAALRPVE RMRRQAAAMA AAEVVAAGPV AAGGGDPVTA GRNGELAVPA
THDEIAALAR TMNDLLRRLN AARARDRAFV ADAGHELRTP LTVLKAELEL AARPGRTREE
LIEAIVNVSD ETDRLIRLAE SLLTLARMDG GLVGQGRVAL DEVLTRSARA ATGFLQARGL
RLRLGVADAQ RPLEVLGDGD MLRRAVDNLL ANAARHAPAG SVVELRGCRT PRRVVGPWVG
VDGPGEVVIV QIRDRGPGFP PEFLPYVFER FRRADTARTR DHGGAGLGLA IVAAIISAHG
GTVEAANCPD GGAVVTVTLP ATAWPPGPPS ASLASRSAAG EGAPGRPGEP RRPDGPARQP
SARDLRSRRR G
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