Gene Francci3_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2393 
Symbol 
ID3906376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2771853 
End bp2772362 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content62% 
IMG OID637879723 
Producthypothetical protein 
Protein accessionYP_481489 
Protein GI86741089 
COG category[R] General function prediction only 
COG ID[COG5485] Predicted ester cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000832802 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0699351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTA TTGCTACCGA GGAACGTATC TCCTGGCAGC GCGCGACCAT CGAGGAGCAC 
ATCCGCCAGG AGAACGCCAA GGATTGGAAG AAGGTCTACG ACACCTTCCT GCGCGACGAG
CGTGCCTTCT ACGACGTCGT CCCGATGAAC GCCCGCTACG AAGGCATCCG CGGTGTGCAG
GACTTCTACG AAATGCTCGC CCTTGCCCTA CCGGACTTCA TCATCACTGT TACCGGAGAA
TACGACCTCC CCGGTTACTC CTGGCGAGAG GTGACCCTGG TAGGGACACA TCAGGGCGAG
TTCGCCGGCA TTGCCCCTCG GGGTCGTCCG GTTCGTTTCG AAGGCGTTGT GCTCTACATC
TTCAGCGGCC AGGAACCGGG CAAAATCATT GCCGAGCGCG CGTACTGGGA CAACGACTCG
ATCTTCCGTC AGATGAAGGG GGAGACCGAC GCTCCGCGCG GCGGCGTGGG CCTGACCGAC
CGCGAACCCA TCCGAGCGGC CATCGCCTGA
 
Protein sequence
MTTIATEERI SWQRATIEEH IRQENAKDWK KVYDTFLRDE RAFYDVVPMN ARYEGIRGVQ 
DFYEMLALAL PDFIITVTGE YDLPGYSWRE VTLVGTHQGE FAGIAPRGRP VRFEGVVLYI
FSGQEPGKII AERAYWDNDS IFRQMKGETD APRGGVGLTD REPIRAAIA