| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2390 |
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| Symbol | |
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| ID | 3906373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2766776 |
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| End bp | 2768833 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637879720 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_481486 |
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| Protein GI | 86741086 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.267497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0227024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG TTTCCCCCCT CGTGAACGCA CCCGACGCGG ACGTGCCCGT GCGGCATCCC
GCGGGCCACC CATCCGGTCC GCCCCCGCCT TCCCGGCCCC GCGGCCGGAT CGGCCGCCTG
GTACGCGGCC CGGCCGGCGA CCCCGCGTGG ATCCGGCCGT CGCTGCTGGC CCTGCTGGCG
GCGACTGCGG TCCTCTACCT GTGGGACCTC AGCGCGTCCG GCTACGGCAA CGGCTTCTAC
GCCGCCGCCA CCCAGGCGGC CACGCACAGC TGGAAGGCGC TGCTGTTCGG CTCGCTGGAC
TCCGGCAACG CCATCACGGT CGATAAACCG CCGGCCTCGC TGTGGGTCTC CGGTCTGTTC
GCCCGGGCCT TCGGGTTCTC GAGCTGGACC GTGCTGGCAC CGCAGGCGCT GGAGGGCGTC
GCCGCGGTGG GGCTGCTGTA TGCCACGGTG CGCCGGACCT CCGGTGCCGC CGCTGGCCTG
CTCGCCGGCG CCGCCTTCGC GCTGACCCCG GTCGCGGTGC TGATGTTCCG GTTCAACAAC
CCGGACGCGC TGCTGGTGCT GCTGCTCGTC GCCGCCGCCT ACTGCACGGT CCGGGCCACC
GAACGGGCGA GCCTGCGGTG GCTGCTGCTG GCCGGCACCT GCGTGGGCTT CGGCTTCCTC
ACCAAGATGG CGCAGGCGTT CCTGGTCGTC CCGGCCCTCA GCCTGGTGTA CCTGACGGCC
GCGCCGACCG GTCTGCGCCG ACGGCTCGCG CACCTCGCCG GCGCCGTGGC CGCGATCGTC
GTCTCGGCCG GCTGGTACCT CGCCCTGGTC GAGCTGTGGC CGGCCTCGTC ACGCCCCTAC
ATCGGCGGCT CCACCAACAA CAGCCTGCTG GAGCTCGCGA TCGGCTACAA CGGCCTCGGC
CGCATCTTCG GTGGCTCCGC CGGTGGTGGC GCCAGCGGTG GCGGGGGTGG GGGTATGACT
ACCGGTTTCG GTGGCGCCAC CGGCATCACC CGGCTGTTCG GGGCGAGCAT GGGGGCGGAG
ATCTCCTGGC TGCTGCCCGC CGCGCTGATC GTTCTCGTGG CCGGCCTGTG GTTCACCCGG
CGGACGCCGC GCACCGACCC GACCCGGGCT GCGCTCGTGC TCTGGGGCGG TTGGCTGCTG
GTCAGCGGGT TGGTGTTCAG CTTCATGAGC GGCATCACCC ACCCCTACTA CACGGTCGCC
CTCGCCCCCG CCGTCGCCGC GCTCGTCGCG TCCGGTGGAA CCGTGTGCTG GCGTGGACGG
GCGCGGATCT CGCACCGCGC CACCCTGGCC GCGATGATCG CGGTGACCGG GCTGTGGGGC
TTCGTCCTGC TGGACCGGGT GGCCTCCTGG CTGCCCGTGC TGCGCTGGAT CATCCTCCCG
GCGAGCGTGC TGGTGGCCGT CGCGCTGGTG GCCGGTGCCG CCCGGCTCAC CAGGATCACC
GCCGTGCTCG CGGCAGCGAC CGTGATCAGC GCCTCGGCAG GCACCTCGGC CTATGCGCTT
GCCACCGCGG CGAACCCGCA CAGCGGCTCC ATCCCGATCT CCGGTCCCGC GGTGGCCGCC
ACGGCCGGCG GCGCCGGGGG TGGGCCGGGC GGGGCCGCGG CGGGCGGCGG CCTGCCCTCC
GGCGCTCCGG GTGGAACCCC ACCGAGCTCG TCCAGCGGCT CGTCCAGCGG TTCCTCCGCT
TCCTCCAGCG ACTCGCCGGT GGCAAGGGGC ACGGGGAGCA CGGCTCTGGT CGCGCTGCTC
AGGACGAGCA CCACGACCTG GGCTGCCGCC ACCACCGGCG GTGCGACCAC CGCCGCCGAG
CTGGAGCTCA GCAGCGGTAA GGCGGTCATC GCGATCGGCG GATGGGACGG CAGCGACCCG
GCACCGACGC TGGCGCAGTT CGAGCAGTGG GTCAGCGAAG GCAAGATCCA CTACTTCGTT
GCCGGCGGGA CCGGGATGGG CGGGGGGCGG AACTCCACCT CTGGCAACGA GATCGCCGCC
TGGGTGGCGG CGCATTTCAC CGCCACCACG GTCGGCGGGC AGACGGTCTA CGACCTCACC
ACGTCCGGCA TGAGCTGA
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| Protein sequence | MTIVSPLVNA PDADVPVRHP AGHPSGPPPP SRPRGRIGRL VRGPAGDPAW IRPSLLALLA
ATAVLYLWDL SASGYGNGFY AAATQAATHS WKALLFGSLD SGNAITVDKP PASLWVSGLF
ARAFGFSSWT VLAPQALEGV AAVGLLYATV RRTSGAAAGL LAGAAFALTP VAVLMFRFNN
PDALLVLLLV AAAYCTVRAT ERASLRWLLL AGTCVGFGFL TKMAQAFLVV PALSLVYLTA
APTGLRRRLA HLAGAVAAIV VSAGWYLALV ELWPASSRPY IGGSTNNSLL ELAIGYNGLG
RIFGGSAGGG ASGGGGGGMT TGFGGATGIT RLFGASMGAE ISWLLPAALI VLVAGLWFTR
RTPRTDPTRA ALVLWGGWLL VSGLVFSFMS GITHPYYTVA LAPAVAALVA SGGTVCWRGR
ARISHRATLA AMIAVTGLWG FVLLDRVASW LPVLRWIILP ASVLVAVALV AGAARLTRIT
AVLAAATVIS ASAGTSAYAL ATAANPHSGS IPISGPAVAA TAGGAGGGPG GAAAGGGLPS
GAPGGTPPSS SSGSSSGSSA SSSDSPVARG TGSTALVALL RTSTTTWAAA TTGGATTAAE
LELSSGKAVI AIGGWDGSDP APTLAQFEQW VSEGKIHYFV AGGTGMGGGR NSTSGNEIAA
WVAAHFTATT VGGQTVYDLT TSGMS
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