| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2385 |
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| Symbol | |
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| ID | 3904592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2761198 |
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| End bp | 2761743 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637879715 |
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| Product | Ham1-like protein |
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| Protein accession | YP_481481 |
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| Protein GI | 86741081 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.23307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0383994 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACC ATGTCTCTCT GATCACCGGC AACGAAGGGA AGGCCCGGGA GTACGCCGCG
CTTCTCGGAA TCGAGGTCAA GGCCGTCAAG GAAGACCTGA TCGAGATTCA GTCCCTCGAC
GTCGAAAAAG TGGTGCGACG AAAGGCCGAG GACGCCTATT CAAAGCTGCA CAGCCCGGTG
CTAGTCGATG ACACCGGCCT AACCCTGAGC GCCTGGAACG GGCTGCCGGG CGCACTGGTC
GCCTGGTTCC TCGACTCGGT GGGCGCTCAA GGTCTGCTCG ATATGGCCGC GTCGGTCACT
GACCGCACGG CCACGGTGAC CACGGCGCTC GGCTACGCCG ACGCTGACGG CGTCCGCGTC
TTCACCGGCA CGCTACAAGG CGTGCTGACC ACCGAACGGC GGGGGCAGGG AGGCTTTGGC
TACGACTCGA TTTTCGCGCC GGACGGTGGC AACCTGACCT TCGCCGAGAT GACCAGCGAC
CAGAAGAACG CCATCTCCCA CCGACGCCTC GCCGTGGACG CGCTCCGGCA AGGACTCGGG
CTGTAG
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| Protein sequence | MIDHVSLITG NEGKAREYAA LLGIEVKAVK EDLIEIQSLD VEKVVRRKAE DAYSKLHSPV
LVDDTGLTLS AWNGLPGALV AWFLDSVGAQ GLLDMAASVT DRTATVTTAL GYADADGVRV
FTGTLQGVLT TERRGQGGFG YDSIFAPDGG NLTFAEMTSD QKNAISHRRL AVDALRQGLG
L
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