Gene Francci3_2371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2371 
Symbol 
ID3904578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2747762 
End bp2749036 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content68% 
IMG OID637879701 
Producthypothetical protein 
Protein accessionYP_481467 
Protein GI86741067 
COG category[S] Function unknown 
COG ID[COG4705] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.982412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0763403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCAC ACATGACCAC CGAACTGACC GTCAGCCGAC CCTCCTCCCG GGAGGGCGAG 
ATGCTGAACA AGGTCCCCGA GATCACGATC TGGTTCTGGG TAATCAAGAT CCTCTGTACC
ACCGTCGGCG AGAGCTTCGC CGACTGGATC AACATGACGC TCGGCGTCGG CCTCACCAGG
ACGGCGCTCC TGTTCACCGC TGTCCTGGCC GCGGTGCTCT ATGCGCAGAT GCGGCTGCGC
CGATACGTGC CGTTGGCCTA CTGGCTCACC GTCGTGGTCG TGAGTATCAC CGGCACGCTC
TACACCGACA TCCTCACGGA CAGCCAGGGC GTTCCGCTGA AGGTGAGCAC CACGATCTTC
GCTCTCCTCC TGGCGGTCGT CTTCGGCGTC TGGTACGCGC GTGAGCGCAC CCTGTCGATC
CACAGCATCA CCTCGACGCC CCGCGAGGCG TTCTACTGGC TCGCGGTCCT GGTGACCTTC
GCGCTCGGTA CCGCCGCCGG CGACTGGACC CTCGAACTCA GCGGCTGGGG CCCGGGCAAG
GCGGTCCTGC TCCCGGCCGC CCTCATCGCG ATCGTCGTCG TCGCCTGGCG GTTCGGCGGG
CAGCCGGTGC TCGCCTTCTG GTTGGCCTAT ATCCTCACCC GGCCGCTGGG CGCCAACATC
GGCGACTGGT TCGCAACCCC GAAATCCGAG CAGGGACTGG GCCTGGGCAC CGCTCTCACC
AGTGTGATCT TCCTCGTCGC CATCGGGGCC ACCGTCCTCT ACCTCACCTG GTCGAAGGCG
GACGTCATCC CCGAGTCGGA GGCGCCGGAC ACCGGCGTCC ACGGCGCGGG CCCCGGCCGA
GAGCGACTCG CCCTCAGCCT CTACGCCGTG GCCGCACTCG CGGCCGGGCT TCTGCTCCAC
CACACCGCGC AGACCCCGCA CACCTCTCCG ATCGCGGCGG AGGAGGGCGG ATCGGCCTCC
AACACCATCC AGCTCACCCC CGCCCAGGCA GTCGCTCACT TCCCAGCGGC CGATATCGCC
AGCCTCAAGG CGATCGTCGA CGACACGCTC ACCAAGGTGA ACACGGGCGA CCAGAGCGGT
GCCAAGGCCC GGATCAAGGG TCTCGAGACG ACCTGGGACG ATGATGAGTC CACGCTCAAG
CCCATGGACA GCAACGCCTG GACGTTCCTC GACGGTCGGA TCGACGACGC CCTCAGCGCA
GTGCGGGCAT CCCACCCTGA CCCCGCCAGC GAGAAGCAGG CGTTGACCGC GCTGTCCACG
TCTTTGGGCG GCTGA
 
Protein sequence
MLPHMTTELT VSRPSSREGE MLNKVPEITI WFWVIKILCT TVGESFADWI NMTLGVGLTR 
TALLFTAVLA AVLYAQMRLR RYVPLAYWLT VVVVSITGTL YTDILTDSQG VPLKVSTTIF
ALLLAVVFGV WYARERTLSI HSITSTPREA FYWLAVLVTF ALGTAAGDWT LELSGWGPGK
AVLLPAALIA IVVVAWRFGG QPVLAFWLAY ILTRPLGANI GDWFATPKSE QGLGLGTALT
SVIFLVAIGA TVLYLTWSKA DVIPESEAPD TGVHGAGPGR ERLALSLYAV AALAAGLLLH
HTAQTPHTSP IAAEEGGSAS NTIQLTPAQA VAHFPAADIA SLKAIVDDTL TKVNTGDQSG
AKARIKGLET TWDDDESTLK PMDSNAWTFL DGRIDDALSA VRASHPDPAS EKQALTALST
SLGG