Gene Francci3_2364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2364 
Symbol 
ID3904571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2738591 
End bp2739835 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content67% 
IMG OID637879694 
Producthypothetical protein 
Protein accessionYP_481460 
Protein GI86741060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.566364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.371889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA CAGACAGCCA TAATCCCGAC TCCCACATCG GGCCGGAGTT CCGTGAGGCG 
TTCCCCTCAT GGTCGGAGTT CCGTTCCTAC GTCACCGATC GGGCTCGCGC AGCGGAGTTC
AATGCCGACC GCGCACTTCA CCAGATCTTG ACCGGGGACT TCGCAGCGCG CCTCATGAAC
CGAACCCCGC ACGACTGGAT CATCTTCGGT TCGCTGGCGC TTCCTTCCCG GCCCGCCACA
GACTTCTCGT GGCCTGCCGA CTTTCTTCCC GCTCAGCCGA ACGAAATCCA TCCCGCGTAT
GTGATGGCCC GATCCGCGTT CGATCTGGAC CTGTGCGCTC TCGACATCAC GGAATCCTAC
GGCGTTCATG TCAAGCAGGC TGTGGATGCG GTCACGGTGA ACGCGGGCGA CACCGCCCGA
GCTGAGCGTG GGCTGGGCCT TGGAGGACTG GTCCGCTACA GCGCCGATGT CAGGGTCTAC
GACAGCGGGA AAATCATGGG AGTGATCGTC GCCCAGCCGA TCGACCCGAG ATACGGGCCC
GGCCAGGCAC GTCCCGTCGA CGACCCAATC GGACTTGAGA TCGACATCAA GCCGCCCGAC
CGGGTTCCTC TGTTCGGCCC GGCCCACCAC GCCGAACGGT CCATCGTTGG CATCGCCGTG
CCCGGCCTGG CGCCCGTTAC CCCCATGATG TACCCCACGG CCAGCCAGCT CGCAGACAAG
ATCTCCATGC TGAGCGGGCC AGCCCCCGGT TCGTCCCGCC AGGTCGCACC TGGCCCTCGC
CACCGCTACA AGGACCTCTT CGACATCCAC TACATGATCC GTACCTGTTC CGTGGAGGCC
CGTCACATGC GGGAGGCGCT TGAGGTCAAC AACCAGGTCC GCTTCGGCCG CGATGGCCTG
CCCCATCCCT ACCACGTCTA CGGAGCCGGC CGCAGACCCG GTGAACTCGA CGTTCCCTGG
CGGTCGGCGG TGAACACGTT CAAGGCCGAC CAGCCACAGC TCGCGCGCTA CCCCGACTTC
GACGCGATGG AACGCGCCGC GGCAGGCTTC GTGGCAGAGC TGACCACAGC GTCTCCGACC
AGCACCTGGG CACCAGGACG CGGCTGGTCC CCTCCCCGCT CGGATCTCCA CGCGCTGGCA
TTCCCCCGGC CACCATCTCT CAGACCCGGT CCACGGACCC CGCCCGCGCA GCCTCGCACG
CTCCCGCCTC ACCCGGGCCA GGCGCCCCGG CCACCAACGC GATAG
 
Protein sequence
MADTDSHNPD SHIGPEFREA FPSWSEFRSY VTDRARAAEF NADRALHQIL TGDFAARLMN 
RTPHDWIIFG SLALPSRPAT DFSWPADFLP AQPNEIHPAY VMARSAFDLD LCALDITESY
GVHVKQAVDA VTVNAGDTAR AERGLGLGGL VRYSADVRVY DSGKIMGVIV AQPIDPRYGP
GQARPVDDPI GLEIDIKPPD RVPLFGPAHH AERSIVGIAV PGLAPVTPMM YPTASQLADK
ISMLSGPAPG SSRQVAPGPR HRYKDLFDIH YMIRTCSVEA RHMREALEVN NQVRFGRDGL
PHPYHVYGAG RRPGELDVPW RSAVNTFKAD QPQLARYPDF DAMERAAAGF VAELTTASPT
STWAPGRGWS PPRSDLHALA FPRPPSLRPG PRTPPAQPRT LPPHPGQAPR PPTR