Gene Francci3_2351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2351 
Symbol 
ID3904558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2725640 
End bp2726347 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content70% 
IMG OID637879681 
Productresolvase-like protein 
Protein accessionYP_481447 
Protein GI86741047 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.329475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTCG GCTACGTCAG AGTCAGCAGT GCCGACCAGA ACACGGTGAG GCAACTTGAC 
GGGGTGGACG TCGAGCGGGT GTTCGTCGAC AAGGCGTCCG GGAAGGACAG CGACCGGCCG
AAGCTCGGCG AGATGATCGC GTTCGTCCGC GACGGCGACA CCGTGCTCGT GCACTCGATG
GACCGCCTCG CGCGCAACCT CGACGATCTG CGCAGCACCG TGCGGATGCT GACGGGCAAG
GGCGTGCGGG TCGAGTTCGT CAAGGAGGGC CTGACCTTCA CCGGTGAGGA CTCGCCGATG
GCGACCCTGC TGCTGTCGGT CATGGGCGCG TTCGCCGAGT TCGAACGCGC CCTCATCCTC
GAACGCCAGC GCGAGGGCAT CGCCGCCGCC AAACAGCGCG GCGTCTACAC CGGCCGCAAA
CCCGCCCTCA CCCCCGACCA GGCGCGTGAT CTGCGCGAGC GCGCCGCCGG CGGCGCGCGG
AAGTCCGACC TGGCCAAGGC GTTCGGCATC AGCCGCGAGA CCGTGTACAC CTACCTGCGG
GCCGCACGCC CGGCCGGATG TGGCAGCGGA TCTCCACCAT CTGACTCACG TGACCGCGCC
GACGGCGCTG TCACCTGCCG GTATGGGGCG GCCTGCCCGG GATCGTCGGC GACGCCGGGA
TCGTCGATGC AGCCGAGTCG GACGGTGACG GGGGCGACGC CGGCGTGA
 
Protein sequence
MRVGYVRVSS ADQNTVRQLD GVDVERVFVD KASGKDSDRP KLGEMIAFVR DGDTVLVHSM 
DRLARNLDDL RSTVRMLTGK GVRVEFVKEG LTFTGEDSPM ATLLLSVMGA FAEFERALIL
ERQREGIAAA KQRGVYTGRK PALTPDQARD LRERAAGGAR KSDLAKAFGI SRETVYTYLR
AARPAGCGSG SPPSDSRDRA DGAVTCRYGA ACPGSSATPG SSMQPSRTVT GATPA