| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2345 |
|---|
| Symbol | |
|---|
| ID | 3904552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 2718322 |
|---|
| End bp | 2719314 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637879675 |
|---|
| Product | DNA methylase N-4/N-6 |
|---|
| Protein accession | YP_481441 |
|---|
| Protein GI | 86741041 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0863] DNA modification methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0319452 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.212487 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCCT CGGTGGTCGC GGGCGGAGCG ACGTCGGTGG TCATGGGTTC TCCGGTCGGC
CAGGCGGCGC AGGTCCTGCG GGGTCTGCCG GACGCCTCGG TGCACTGTGT GGTGACCTCG
CCGCCGTACT TCGGGTTGCG TGACTACGGC GAGCCCGGCC AGATCGGCCT GGAGCCCACG
CCCGCGGCCT ACGTCGCCCG GCTCGCCGAG GTGTTCACGG AGGTTCGCCG GGTGCTGCAC
CCGGACGGGA CGTGCTGGCT GAACCTGGGC GACAGCTACG CGGGCAAGGC CAACGGCGGC
CCGTCGGTGG GCCTGACACG CCGCGCCGAC CGGGCCGAGC TGATTCCGCC GCGGCGGAAC
ACCACCGCGG CCGCGCCCTA CAAGAGCCTG CTCGGTATCC CCTGGAGGGT CGCGTTCGCG
TTGCAGGACG CCGGCTGGAC GGTCCGCAAC GCGATCGTGT GGGCCAAGAC GAACGCGATG
CCGGAGTCGG TGACCGACCG GTTCGCCTCG CGTACCGAGA CGCTGTTCCT GCTGACCCGC
TCGGCGCGCT ACCACTTCGA CCTCGACCCC GTCCGGGAGA CACCGGTCGA CCCGACCGGC
GGTGCTGAGT GGGCCCAGCG CAGGAAGCAG GGTGTGCCCG GCCGGCGGGG CCGCAACCCC
GAGTCGTCGG TGACGGCCGC CGACCGCGAC TTCGCCGCCC ACCAAGCCGG CCGTAATCCG
GGCGACGTCT GGCAGATCCC GGTCGCCAAC TTCCCCGGCG CGCACTTCGC CGTGTTCCCG
CCCGAGATCC CGCGGCGGGC GATCCTGACC GGCTGCCCGC CCGGCGGGGT CGTGCTCGAC
CCGTTCTCCG GGTCGGCGAC CACCGGCATG GTCGCGCTGC AGCTCGGCCG CCGCTACGTC
GGGATCGATC TCAACCCCGA CTATCACCGC CTCGCGCTCC GTACCCGGCT GCTGGAGCGG
CCGCTGCCCG GTATCGACCA GCCGGCCTCC TGA
|
|---|
| Protein sequence | MSSSVVAGGA TSVVMGSPVG QAAQVLRGLP DASVHCVVTS PPYFGLRDYG EPGQIGLEPT
PAAYVARLAE VFTEVRRVLH PDGTCWLNLG DSYAGKANGG PSVGLTRRAD RAELIPPRRN
TTAAAPYKSL LGIPWRVAFA LQDAGWTVRN AIVWAKTNAM PESVTDRFAS RTETLFLLTR
SARYHFDLDP VRETPVDPTG GAEWAQRRKQ GVPGRRGRNP ESSVTAADRD FAAHQAGRNP
GDVWQIPVAN FPGAHFAVFP PEIPRRAILT GCPPGGVVLD PFSGSATTGM VALQLGRRYV
GIDLNPDYHR LALRTRLLER PLPGIDQPAS
|
|---|
| |