Gene Francci3_2337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2337 
Symbol 
ID3904544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2711606 
End bp2712811 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content71% 
IMG OID637879668 
Productacyltransferase 3 
Protein accessionYP_481434 
Protein GI86741034 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.844006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC AGCACCCACC GTTCGCCAGG TCTCCCCGCC GGGTCCCCCA CCAGCGAAGC 
CCCACAGCGG AGCCGATACC CGTACCCACA CCCAGGGCCG GCACGCTGGC CGCGGCCTTC
GATCCTCACC GCAACAACCT CAACGCGCTG CGTCTCATCC TGGCCGGCGC GGTGCTCGTG
TCCCACTCAT GGCTGTTCGT CCGGGGAGAA CCGGACCCGT TGACACGTCT GCCCGGTGCC
CCCGACCTCG GCACGTTCGC CGTGGACGGC TTCTTCCTCC TCAGCGGCTT CCTGATCATC
CGTAGCCACC TGCGGGCACC ATCCACCGCC CGTTTCCTCT GGCACCGGTT CCTGCGGGTC
GTGCCCGCCT TCTGGGTCTG CCTCGCGCTG ACCGCCGTCG CGATCGGTCC ACTGCTGTGG
CGCCTGAACC GGGGCACCAC CGCCGGCTAC CCCTGGACCG GCCATGACTC GGCGGTCCGC
TACCTGCTCG TCAACGCGGC GCTGAAGATG AACCAGTTCA ACATCGGCGA CCTACGCGCC
GGGCAGGCCG TGGACGGCCC CCTGCACACC CTGTTCTTCG AAGCGCTGTG CTACCTGATG
GTCGGCGTTT TCGGCACGGT GGGGATCCTG CGCCGCCGCC GCGGGCTCGT CCTCACCCTC
GCCGTCGGCG GGTGGCTGCT CGCCGTCGGC GGGGCGCTCC TCGGCGCCAA CCGGCTCACC
GACTCCCACA TCCTGAAGTA CACGGCCGTC TTCCTCATCG GGGCGGCGAT GTTCCTCTAC
GCCGACCGCA TCCCGCGCAG CCGGGCCCTA CTCATCGCCG CCGCCGCCCT GCTCGCCGCG
GGCCTGCTCA TCCCCCACGC CTACCGGCCC CTCGCCCTGG CCCCGCTGGC CTACCTGCTG
CTGTACGCCG GAACCGGACG GGGGCTGTCG CGGGTGGGGG CGCGCCGCGA TCTGTCCTAC
GGCATCTACG TCTACGCCTG GCCGCTGCAA CTGCTCCTGC TCGAAGCCGG GGTCGATGCG
GGTATCGGTA CGGGTGCCGT CGTCGTGCAC ATCGCGGCCT CCCTCGCCGT CACCTCCCTC
GCCGCCCTCG CAAGCTGGTA TGCCATCGAA GCACCCGCCC TTGCGCTGAA ATCCTGGCAA
CCGCCGTCGC CAAGACGTTC GACGGACGCG GGTGCGGCGC ACCTGTTCGT CCCGCGGAGC
CGTTGA
 
Protein sequence
MTDQHPPFAR SPRRVPHQRS PTAEPIPVPT PRAGTLAAAF DPHRNNLNAL RLILAGAVLV 
SHSWLFVRGE PDPLTRLPGA PDLGTFAVDG FFLLSGFLII RSHLRAPSTA RFLWHRFLRV
VPAFWVCLAL TAVAIGPLLW RLNRGTTAGY PWTGHDSAVR YLLVNAALKM NQFNIGDLRA
GQAVDGPLHT LFFEALCYLM VGVFGTVGIL RRRRGLVLTL AVGGWLLAVG GALLGANRLT
DSHILKYTAV FLIGAAMFLY ADRIPRSRAL LIAAAALLAA GLLIPHAYRP LALAPLAYLL
LYAGTGRGLS RVGARRDLSY GIYVYAWPLQ LLLLEAGVDA GIGTGAVVVH IAASLAVTSL
AALASWYAIE APALALKSWQ PPSPRRSTDA GAAHLFVPRS R