Gene Francci3_2331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2331 
Symbol 
ID3904538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2707759 
End bp2708661 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content67% 
IMG OID637879662 
Productputative protease 
Protein accessionYP_481428 
Protein GI86741028 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCGT CCCGATCAGC CCGTATACCA CGCCCATTCC TTGCTGCCGT GCTTGCGGTA 
AGCCTGCCGC TGCTGACCGG TATATCAGGG TCGGGCTTGT CTGGGTCCGC CGCCGCGGCC
ACCCGGACAA AGCTAACCTG GAAACCGTGT GAGAACGGGT TGGAGTGCGC GACTCTGCCC
GTTCCGTTGG ACCACGCCAG GCCTGCCGCA GGCACGATCA ACCTGGCGTT GATCCGTGCT
CCGGCTCGCC AGCCACACCG GCGGATCGGC TCGCTGGTGA TGCTGGCCGG TGGGCCGGGC
CAGTCGGGAG TCGGGTTCAT CCGCGACTGG CTGGGCTTCT TCGGCGCGTC GTTGCGCGAC
CGTTTCGACA TCGTCGGGTT CGACCAGCGG GGTGTCGGTG GGAGCGCGCC GGTCCGTTGC
AGCAGCGGGC AGGATAATGA TCCGCCGGCC GCCACCTCCC CGTTCGCGAT CGACTCCCGC
GCTTCCCGCG CTGGGAGTGA GGATGACGAC GTGTACCAGG AGCTGGTTGA CGACAGGCGT
CAGTGGGCGC AGGGCTGTGT ACGGTTCAGC GGTGCTGAAC TGCCGTACCT GTCGACCGAG
GCCGCGGCCC GGGATCTCGA TCTGCTGCGA GCCGCGCTCG GCGAGGACAA GATCACCTCT
TACGGGGGAT CCTACGGCAC CGTGCTGGGC GCCACCTACG CCAGCATGTT CCCGACCCGG
ATCCGGGCGC TGGTGCTGGA CGGCGTAGAA GATCCGAACG TGTGGATGAA CCAACCGCAG
GAGGACCTAC GCCGAATGGC GCAGGGCTTC GAGACCGCGC TGGGCGCATT CCTCGCCGAC
TGCAAGGCCC GGCCCAACTG TGGCTTCGGC CACGGCGACC AGGGTGACCC GCAAAGTCAT
TGA
 
Protein sequence
MRPSRSARIP RPFLAAVLAV SLPLLTGISG SGLSGSAAAA TRTKLTWKPC ENGLECATLP 
VPLDHARPAA GTINLALIRA PARQPHRRIG SLVMLAGGPG QSGVGFIRDW LGFFGASLRD
RFDIVGFDQR GVGGSAPVRC SSGQDNDPPA ATSPFAIDSR ASRAGSEDDD VYQELVDDRR
QWAQGCVRFS GAELPYLSTE AAARDLDLLR AALGEDKITS YGGSYGTVLG ATYASMFPTR
IRALVLDGVE DPNVWMNQPQ EDLRRMAQGF ETALGAFLAD CKARPNCGFG HGDQGDPQSH