Gene Francci3_2313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2313 
Symbol 
ID3904520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2691743 
End bp2692516 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content70% 
IMG OID637879644 
Productmethylenetetrahydrofolate reductase 
Protein accessionYP_481410 
Protein GI86741010 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.383678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0348047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGGCT TCGAGATGAT CTGCGAGATC GAGCCGCCGA CCCGGCCGGA CCTGACCCAC 
GCCCGCCACC AGATCGGCGT CCTGAGCCCC GTCACCGACG CGTTCCTGAT CCCCGACAAC
CACATCGGAC GCGCGACGGT GTCGAGCATC GCCGTCGCCC ACGAGGTGGC GACGATGGGG
GGACGCAGCA TCGCCTGCGT GAACTCCCGC GACCGTAACC TGCTCGGCTT CCGCCGCGAC
CTGCTCACCG CCGCGGCCTA CGGCGTCGAG GAATTCCTGT TCGTCCACGG CGACAAACCC
ACCGCCGGGA ACCGGACCGG CGACCTGACC GTGCGCGCGA TGATGGACGA GGCCCGCGCG
GCCAGCGAGG ATCCGGTCTT CGCGGACATG CCGGCGTTCC GGGTCGGCGC CGCGGCTGGC
CTACGTCCAC TGCCCACCTG GAAACGAGCG GCCGACTTCC TGTTCGTACA GATCAGCTAC
TCGGTGGACG CCCTGCTGCG CTGGCGCGAC GCCCATCCGG TCGAACTGCC GATCTACGCC
GGCGTCATGG TCCTCGCGAG CGCCGGGATG GCCCGCCGCC TCGCCGCGGC CATCCCCGAC
ATCGACATTC CCGACAACCT CGTCCAAGCA GTCGAACGGG ACCAGGCGGC CGGGGTCGAA
GCGGCCTGCG ACCAGGTGCT ACGGCTGCGC GACAGCGGCG CCTTCGCCGG TGTGCACCTC
GTCCCGGTTA GCCGCTACCG CCAGGTCGCC ACCCGACTTG AGGACCTTCT CTAA
 
Protein sequence
MRGFEMICEI EPPTRPDLTH ARHQIGVLSP VTDAFLIPDN HIGRATVSSI AVAHEVATMG 
GRSIACVNSR DRNLLGFRRD LLTAAAYGVE EFLFVHGDKP TAGNRTGDLT VRAMMDEARA
ASEDPVFADM PAFRVGAAAG LRPLPTWKRA ADFLFVQISY SVDALLRWRD AHPVELPIYA
GVMVLASAGM ARRLAAAIPD IDIPDNLVQA VERDQAAGVE AACDQVLRLR DSGAFAGVHL
VPVSRYRQVA TRLEDLL