Gene Francci3_2310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2310 
Symbol 
ID3904844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand- 
Start bp2688413 
End bp2689009 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content74% 
IMG OID637879641 
ProductTetR family transcriptional regulator 
Protein accessionYP_481407 
Protein GI86741007 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.145827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones7 
Fosmid unclonability p-value0.0377448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGGTG TCGGGGTAGC GCCCAGTCGG GCCCGGCTGG TGGACGCGGC CGTGGCCTGC 
GTGCTGGAGC AGGGCTGGGA GGCCACGTCC ATGCAGGCGG TTCGGCGTCG GGCCGGTGTC 
AGTAACGGCA GCCTGTTTCA CTACTTCCCC ACCCGGGGGG ACCTGGCCGC GGCCGTGGTG 
GGCGCGGGTC TTGCCGATCA TCAGGGCGCG CTGTGGGGTG AGCTGCACAC CTCGACCGGG 
CCCCGTGATG GCGTGACCCG CCTGGTCACC CGCCATCTGC GGTGGGTGGA AGAGCATCCG 
CGGCTGGCCC GACTGCTGCT GACCGCGCCG GTCGATGTCC TGCGCGGCTC GATCGATGAG 
CGCACCGCCG CGGACAACCG CGGCTTCTTC GCCGCGGTGG CCGACTGGCT GCGTGGCCAC 
GGCTGGTCCG ACCGGCCCGA CCTGGCGGTC GTCGTCGCGC TGTGGATCGG CCCCGCCCAG 
GAATACAGCC GCCACTGGCT CGCCCGCCCC GCGGGCTCCC CGACGCTCGT CGCCGACGAC 
CTGGCCGACG CCGCCTGGCG GACGCTCGGT CCCCTGCTCA CCCCGCGGAA GGAGTAA
 
Protein sequence
MRGVGVAPSR ARLVDAAVAC VLEQGWEATS MQAVRRRAGV SNGSLFHYFP TRGDLAAAVV 
GAGLADHQGA LWGELHTSTG PRDGVTRLVT RHLRWVEEHP RLARLLLTAP VDVLRGSIDE 
RTAADNRGFF AAVADWLRGH GWSDRPDLAV VVALWIGPAQ EYSRHWLARP AGSPTLVADD 
LADAAWRTLG PLLTPRKE