| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2300 |
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| Symbol | |
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| ID | 3904834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2682410 |
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| End bp | 2683447 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637879631 |
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| Product | pentapeptide repeat-containing protein |
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| Protein accession | YP_481397 |
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| Protein GI | 86740997 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1357] Uncharacterized low-complexity proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000752712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0184634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCGACG ATCTCGATCC CGCCGCGGGA ATCACCGGGG ACGCCCGCGG CCGGCTGCGT
GCCGACTGCG GGCGCTGTTT CGCGCTGTGC TGCGTGGCAC CGGCGTTCTC CGCCTCGGTG
GACTTCGCGA TTGACAAACC CGCCGGCACG GCCTGCCCCA ACCTGAACGC GGGCTTCCGC
TGTGCCGTCC ACGAGCAGCT GCGGCCGCGG GGGTTCCGCG GCTGCGCCGT GTATGACTGC
TTCGGCGCCG GGCAGCAGGT CTGCCAGGTC ACCTACGGCG GGCGGGACTG GCGAGCGGCC
CCGGACAGTG CCCGGCAGAT GTTCGATGTC TTCGCGGTCA TGCGGACGCT GCACGAGCTG
CTGTGGTATC TGAGCGAGGC GCTGAGCCGG CCCGCCGCCG CCCCGCTGCA CGCCGAGCTG
CATGACGCCC GCGCTCGCAC CATGCTGCTG ACCTGCGCCG ACGCCGACAC GCTGCTCGCC
GTGGACGTCC CCGCGCTGCG TCAGGCGGTC CATCTGCTGT TGCTGCAGGC CAGCGACCTG
GTCCGCGCCG AGCTGCCGGG CGGTGCCGGG AACAGGCGTC CCCGGCGGCG CCCCCGCGGC
GCCGACCTGC TCGGCGCGAA CCTCGCCGGG GCGGATCTGC GCGGCGCGGC GCTGCAGGGA
ACCCTCCTGA TCGGCGCGGA TCTGCGGGGG GCGGATCTGC GCGGCGCCGA CCTGCTCGGC
GCTGACCTGC GCGACACCGA CCTGCACGGC GCCAACCTGC ACGGCGCCCT GTTCGTCGTT
CAGGCCCAGC TCGACGCCGC CCGCGGGGAC GCCACCACGG CGCTGCCCCC GGCTCTGACC
CGCCCCGTGC ACTGGACGCG CACGGCGGAC CCGACGCGGC CGGACCCCAG AACGCACCCC
GTGGCGGGCT CGGGCCCCGG GCCCGGGACG GTGCCGATCC CCTCGTCGTC GCCCAGCGCG
GCCCGGCCGC GGCGGTCGGC GAGTTCTCCT CGGTCGCCTC GTTCCCCTCG GTCGCCTCGT
TCCCCACGCC GCCGCTGA
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| Protein sequence | MPDDLDPAAG ITGDARGRLR ADCGRCFALC CVAPAFSASV DFAIDKPAGT ACPNLNAGFR
CAVHEQLRPR GFRGCAVYDC FGAGQQVCQV TYGGRDWRAA PDSARQMFDV FAVMRTLHEL
LWYLSEALSR PAAAPLHAEL HDARARTMLL TCADADTLLA VDVPALRQAV HLLLLQASDL
VRAELPGGAG NRRPRRRPRG ADLLGANLAG ADLRGAALQG TLLIGADLRG ADLRGADLLG
ADLRDTDLHG ANLHGALFVV QAQLDAARGD ATTALPPALT RPVHWTRTAD PTRPDPRTHP
VAGSGPGPGT VPIPSSSPSA ARPRRSASSP RSPRSPRSPR SPRRR
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