Gene Francci3_2291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2291 
Symbol 
ID3904825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2671636 
End bp2672124 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content72% 
IMG OID637879622 
ProductMarR family transcriptional regulator 
Protein accessionYP_481388 
Protein GI86740988 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00374497 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00208025 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCAGCTAC GGCTGGAGCG GGACGCGCGG GCGTTGACCG AGGTCGTCAC TCGACTTCGG 
CGGGTGCTGC GGACGAGTAT CCGCAGCGAC TACCCGTGGG AGGCCCTGCC GATGGCCCAG
GTGGAGTTGT TGCAATGCCT GCAGGAACGC GATGGCGCGC GGGTGGGCGA GCTCGCCGGC
CTGCTCCACC TGGCCCCGAA TACGGTGAGC ACCCTGGTGC AACAGATGTC GGACGCGGAT
CTTCTGCGGC GGGTCACCGA CCCGGCCGAC CGGCGCGCGG CCCGGGTGTC GTTGACCGAG
ACCGGTACCC GCCATCTGCA GGGGTGGCGC GAGGCCCACG AACGCAGGCT CGGCGACGCA
CTGGGCCGGC TCGCCGCCGC CGACCAGGCC GTTATTGTCG AAGCCTTGCC GGCCCTGTCA
CGCCTGGTCG AACAGCTCGA TGACCGCCGC CCGGCCGACC CGTCCTCCGT CGCCACCGGC
GGACCCTGA
 
Protein sequence
MQLRLERDAR ALTEVVTRLR RVLRTSIRSD YPWEALPMAQ VELLQCLQER DGARVGELAG 
LLHLAPNTVS TLVQQMSDAD LLRRVTDPAD RRAARVSLTE TGTRHLQGWR EAHERRLGDA
LGRLAAADQA VIVEALPALS RLVEQLDDRR PADPSSVATG GP