Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2283 |
Symbol | |
ID | 3904817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2663745 |
End bp | 2664266 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637879614 |
Product | TetR family transcriptional regulator |
Protein accession | YP_481380 |
Protein GI | 86740980 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000171234 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000491617 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCATGCCG CGGCGCGCGC GCTGCAGGCC GAGCGGGGTC GGCACGAGAT CACGGTGCCG CTGGTCGCCG CCCGGGCGGG GGTGACCGCC TCCACCGTCT ACCGGCGCTG GGGGGATCTG ACCGAGCTGC TCGCCGACGT CGCCGCCGAG CGGCTGCGCC CGGAGACCCC GCCGGTGGAC ACCGGGTCGC TGCGCGGCGA TCTCGCCGCC TACTGCGAGC AGTACCTGGA GGAGATGTCC TCCCCCGCGG GCCGGGCGTT CCTGCGCGAC CTGGTCGCTT CCTGCGGCGA CGACCGGCCG GCGTGCCGCT GTGACCTGTA CATCCGCGAG CAGATCGGGG TCATCGTCGA ACGGGCCGCG CGTCGCGGTG AACCCACCCC CGGGGTTGGT GAGATCGTCG AGGGAGTCAT GGCGCCGATG ATGTACCGCA TCCTGTTCGT CGCCGACCCG GTCGATCTCG CCGACGCCCG CCGGTTGGTG GACGCCCTAC TCGCCCGCGG CGGTGGTCAG CCGCGCGGGT AG
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Protein sequence | MHAAARALQA ERGRHEITVP LVAARAGVTA STVYRRWGDL TELLADVAAE RLRPETPPVD TGSLRGDLAA YCEQYLEEMS SPAGRAFLRD LVASCGDDRP ACRCDLYIRE QIGVIVERAA RRGEPTPGVG EIVEGVMAPM MYRILFVADP VDLADARRLV DALLARGGGQ PRG
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