Gene Francci3_2283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2283 
Symbol 
ID3904817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2663745 
End bp2664266 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content74% 
IMG OID637879614 
ProductTetR family transcriptional regulator 
Protein accessionYP_481380 
Protein GI86740980 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000171234 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000491617 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCATGCCG CGGCGCGCGC GCTGCAGGCC GAGCGGGGTC GGCACGAGAT CACGGTGCCG 
CTGGTCGCCG CCCGGGCGGG GGTGACCGCC TCCACCGTCT ACCGGCGCTG GGGGGATCTG
ACCGAGCTGC TCGCCGACGT CGCCGCCGAG CGGCTGCGCC CGGAGACCCC GCCGGTGGAC
ACCGGGTCGC TGCGCGGCGA TCTCGCCGCC TACTGCGAGC AGTACCTGGA GGAGATGTCC
TCCCCCGCGG GCCGGGCGTT CCTGCGCGAC CTGGTCGCTT CCTGCGGCGA CGACCGGCCG
GCGTGCCGCT GTGACCTGTA CATCCGCGAG CAGATCGGGG TCATCGTCGA ACGGGCCGCG
CGTCGCGGTG AACCCACCCC CGGGGTTGGT GAGATCGTCG AGGGAGTCAT GGCGCCGATG
ATGTACCGCA TCCTGTTCGT CGCCGACCCG GTCGATCTCG CCGACGCCCG CCGGTTGGTG
GACGCCCTAC TCGCCCGCGG CGGTGGTCAG CCGCGCGGGT AG
 
Protein sequence
MHAAARALQA ERGRHEITVP LVAARAGVTA STVYRRWGDL TELLADVAAE RLRPETPPVD 
TGSLRGDLAA YCEQYLEEMS SPAGRAFLRD LVASCGDDRP ACRCDLYIRE QIGVIVERAA
RRGEPTPGVG EIVEGVMAPM MYRILFVADP VDLADARRLV DALLARGGGQ PRG