| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2271 |
|---|
| Symbol | |
|---|
| ID | 3905039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2648126 |
|---|
| End bp | 2649043 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637879602 |
|---|
| Product | dolichyl-phosphate beta-D-mannosyltransferase |
|---|
| Protein accession | YP_481368 |
|---|
| Protein GI | 86740968 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000405527 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00229126 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCGC GAAACGACAC CGACAGCGCC ACCCACCGTG ACGCCACCCG GGCAGACACC
ACCGCGGACA TGGTCCCTGA CCAGGAGAGG AAGCGCGTGG ATCCCAACCG CGTTGTCGTC
TGCGTCCCGA CCTACAACGA ACGGGACAAC CTACCGGACA CCGCCCGCCG CCTGCGGACG
GCCAACCCGA CGGTCGACCT GCTCGTCATC GACGACGCCA GCCCCGACGG CACCGGGAAG
ATCGCCGACG AACTCGCCGC CTCCGACGAC CACATCCACG TCCTGCACCG CGAAGGCAAA
TCCGGCCTCG GCACCGCCTA CGTCGCCGGG TTCTCCTGGG CACTACACCA CGGCTACACC
GTCATCGTCG AAATGGACGC CGACGGCTCC CACCAACCCG AGCAGCTACC CCGCCTGCTC
GCCGCCCTCG ACCACGCCGA CCTCGTCATC GGATCCCGCT GGATACCCGG GGGAGAGGTC
CGCAACTGGC CGCGGCGCCG CTTCCTGCTC TCCCGCGGCG CCAACCTCTA CGTCCGCGCC
GCCCTCGGCA TACCCCTACG CGACGCCACC GCCGGCTTCC GCGCCTACCG CGCCGACGTC
CTCCGCGACC GCGACCTGCA CCGCGTCACC TCCCAGGGCT ACTGCTTCCA GGTCGACCTC
GCCTGGCAGG CCTGGCGCCG CGGCTTCCGC GTCCGCGAAG TCCCCATCAC CTTCGTCGAA
CGCGAACGCG GCACCTCCAA GATGAGCAAC GCCGTCGTCG CCGAAGCCCT CTGGCGCGTC
GCCTGGTGGG CCGCCACCAC CCGACGCCAC CGCCCCACCC CGAAGACAAC CACCGACACC
ACACCCCACG AGCCCCTCCA CACCCCCCAG GACCGCAACG TCACCCAGGA CCGCAACGTC
ACCTCCGGCC ACGCCTGA
|
|---|
| Protein sequence | MTPRNDTDSA THRDATRADT TADMVPDQER KRVDPNRVVV CVPTYNERDN LPDTARRLRT
ANPTVDLLVI DDASPDGTGK IADELAASDD HIHVLHREGK SGLGTAYVAG FSWALHHGYT
VIVEMDADGS HQPEQLPRLL AALDHADLVI GSRWIPGGEV RNWPRRRFLL SRGANLYVRA
ALGIPLRDAT AGFRAYRADV LRDRDLHRVT SQGYCFQVDL AWQAWRRGFR VREVPITFVE
RERGTSKMSN AVVAEALWRV AWWAATTRRH RPTPKTTTDT TPHEPLHTPQ DRNVTQDRNV
TSGHA
|
|---|
| |