| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2266 |
|---|
| Symbol | |
|---|
| ID | 3905034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2644970 |
|---|
| End bp | 2645449 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637879597 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_481363 |
|---|
| Protein GI | 86740963 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0142951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00561226 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGTG CCGTGAGCAC CCCCGCCTTC GCCTCCCTCG TCACCGCCTG GCGCAAGTCC
AGCCGCAGCG AGCCGACCGC CAACTGTGTT CAGGTGGCCG CGGCCGGGGC TGGCGCGGCC
CGCCGGATAG GCGTCCGCGA CTCCAAATTC CCGTCAGGCC CTGATTTGTG GTTCACCCCG
GCCGTCTGGG CGGCCTTCGT CGACCAGACC AGGCGGCAGC CCGGCGCGCA GATCCGGGAC
GGCGGCGTCA TCACCGGGCA CATTCCGGCC GAGCAGGTCC CAGCGGACTT CCACAGGGAC
GACAAGGTCT TCGAGCCGGG ACGGCCGGCG ATCACGATGC GCGGTACCGC CGGTTTGGAT
GGCCCGGTCC TCTACTTCAC CGAGGTCGAG TGGGAGGCCT TCGTCGCCGG CGTGACGGCC
GGCGAGTTCG ACGACCTGCC CGGCGGCCTG GCGGAGGAGC CAGGGCGCCC CAGCCGGTAG
|
|---|
| Protein sequence | MNSAVSTPAF ASLVTAWRKS SRSEPTANCV QVAAAGAGAA RRIGVRDSKF PSGPDLWFTP
AVWAAFVDQT RRQPGAQIRD GGVITGHIPA EQVPADFHRD DKVFEPGRPA ITMRGTAGLD
GPVLYFTEVE WEAFVAGVTA GEFDDLPGGL AEEPGRPSR
|
|---|
| |